RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Sh3yl1O08641 340 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mapk12O08911 367 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 UncxO08934 530 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Axin1O35625 863 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Krt4P07744 525 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ptpn1P35821 432 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dlx2P40764 332 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 SnnP61807 88 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Clec4fP70194 548 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 InhbbQ04999 411 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Atp13a5Q3TYU2 1216 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ceacam5Q3UKK2 947 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ncoa4Q5U4H9 625 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 OgdhQ60597 1023 aaKnown RBP10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mapre1Q61166 268 aaKnown RBP10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pik3r3Q64143 461 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 IgflQ6B9Z0 140 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tmem132dQ76HP3 1097 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ireb2Q811J3 963 aaKnown RBP10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Arhgap22Q8BL80 702 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cacnb2Q8CC27 655 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 ZwilchQ8R060 589 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr1325Q8VF43 315 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nsmce2Q91VT1 247 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ugp2Q91ZJ5 508 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gps1Q99LD4 471 aaKnown RBP10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tsc22d4Q9EQN3 387 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ptf1aQ9QX98 324 aa10.02□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Col15a1O35206 1367 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Scn4aQ9ER60 1841 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ppef2O35385 757 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AgxtO35423 414 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rrm2P11157 390 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Marcksl1P28667 200 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ftl1P29391 183 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Slc26a1P58735 704 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vps45P97390 570 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 1700013D24RikQ0P521 120 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Samd12Q0VE29 161 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Xrra1Q3U3V8 786 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pik3r6Q3U6Q4 756 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tigd5Q499M4 642 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tom1l2Q5SRX1 507 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Naa50Q6PGB6 169 aaKnown RBP10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Otop3Q80UF9 577 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Chtf18Q8BIW9 969 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mterf2Q8BKY8 385 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Fbxw19Q8C2W8 466 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trim32Q8CH72 655 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kiaa0513Q8R0A7 407 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vmn1r213Q8R278 384 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Pcdhb8Q91XZ2 779 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 BniplQ99JU7 328 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ddx50Q99MJ9 734 aaKnown RBP10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Yif1bQ9CX30 311 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 CygbQ9CX80 190 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ccdc77Q9CZH8 489 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 RnmtQ9D0L8 465 aaKnown RBP10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Taf7lQ9D3R9 471 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Plin3Q9DBG5 437 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cpne8Q9DC53 577 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nrf1Q9WU00 503 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mical3Q8CJ19 1993 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cyp4a29A0A087WPC3 509 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr652B9EHE6 318 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Smok3aC0HKC8 504 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Smok3bC0HKC9 504 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Zfp266E9Q2S7 604 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cbfa2t3O54972 620 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 ChrngP04760 519 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 SftpbP50405 377 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 CidecP56198 239 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Copz1P61924 177 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Cnnm1Q0GA42 951 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mrpl10Q3TBW2 262 aaKnown RBP10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Kcnj11Q61743 390 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 BC080695Q66JY9 481 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Dhx37Q6NZL1 1150 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Olfr118Q7TRJ6 321 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Rhbdf2Q80WQ6 827 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 QarsQ8BML9 775 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AgmoQ8BS35 447 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Ccdc32Q8BS39 179 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tgm4Q8BZH1 670 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tbc1d14Q8CGA2 694 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Unc45bQ8CGY6 931 aaKnown RBP10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Vps37bQ8R0J7 285 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Necab2Q91ZP9 389 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Nek8Q91ZR4 698 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 AasdhpptQ9CQF6 309 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Snx2Q9CWK8 519 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gins2Q9D600 185 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 TesclQ9DAJ7 231 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Tor3aQ9ER38 385 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 IdeQ9JHR7 1019 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Zbtb32Q9JKD9 465 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Trpc3Q9QZC1 836 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Mia3Q8BI84 1930 aa10.01□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Gm21149A0A0G2JFY7 255 aa10□□□□□ -0.81
Hmgb1-201ENSMUST00000085546 Skor2A7M7C7 1008 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms