RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Pbxip1Q3TVI8 727 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ccdc160Q3UYG1 323 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ndufaf2Q59J78 168 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rbl2Q64700 1135 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 R3hdm2Q80TM6 1044 aaKnown RBP12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Dyrk4Q8BI55 632 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Smad3Q8BUN5 425 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Samd7Q8C8Y5 445 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tldc1Q8K0P3 455 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Olfr1414Q8VGU5 312 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 FtcdQ91XD4 541 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Mrpl9Q99N94 265 aaKnown RBP12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tcirg1Q9JHF5 834 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Scnn1bQ9WU38 638 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cldn3Q9Z0G9 219 aa12.4□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gm29554A0A087WNW4 188 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tcp11x2A2AEI7 503 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Olfr310B2RVZ1 332 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Dcpp2E9PYC2 171 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gm3138K7N754 218 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Dcpp1L7N1X9 171 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tap2P36371 702 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Elk3P41971 409 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Shmt1P50431 478 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gp1bbP56400 206 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Irf5P56477 497 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Serpinb6dQ3UWK8 375 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rbbp7Q60973 425 aaKnown RBP12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Znf598Q80YR4 908 aaKnown RBP12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 B3galt6Q91Z92 325 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cdk9Q99J95 372 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gstt4Q9D4P7 240 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Xrn2Q9DBR1 951 aaKnown RBP12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Pgap3A2A559 320 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Trim30bE9PVL6 203 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Zfp846G3X996 541 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Htr2cP34968 459 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Inpp1P49442 396 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Samd11Q1RNF8 542 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ccdc61Q3UJV1 511 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tmem199Q5SYH2 208 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Vtcn1Q7TSP5 283 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Q8BWG4 1187 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Kdelr1Q99JH8 212 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 XpotQ9CRT8 963 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Calr3Q9D9Q6 380 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Fbxo17Q9QZM8 286 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cyp4a29A0A087WPC3 509 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Grik3B1AS29 919 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Zfp558E9Q1J0 407 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Birc5O70201 140 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 AurkcO88445 282 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 CalrP14211 416 aaKnown RBP12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Myl2P51667 166 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Scrn3Q3TMH2 418 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ero1aQ8R180 464 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 PigxQ99LV7 254 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Themis3Q9CU24 569 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tk2Q9R088 270 aa12.39□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tet3Q8BG87 1668 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ppp1r36D3Z0R2 411 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Chrna1P04756 457 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ephb3P54754 993 aaKnown RBP12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Tex11Q14AT2 947 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 MyrflQ3UN70 904 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rap1gap2Q5SVL6 712 aaKnown RBP12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Abcg2Q7TMS5 657 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Trpa1Q8BLA8 1125 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Calcoco1Q8CGU1 691 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Taf10Q8K0H5 218 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Wnt9aQ8R5M2 365 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Olfr1502Q8VG66 316 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rfc5Q9D0F6 339 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 LrmdaQ9D9B4 229 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gprc5dQ9JIL6 344 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Kifc1Q9QWT9 674 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ror2Q9Z138 944 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Catsperg2C6KI89 1145 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gm43302L7N1X8 611 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Vmn2r39L7N2E5 861 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cyp2b19O55071 492 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gbp10Q000W5 611 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Itih3Q61704 889 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Cypt2Q6P924 180 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Q8BHN7 327 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Rassf10Q8BL43 508 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 TbcdQ8BYA0 1196 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ndufa10Q99LC3 355 aaKnown RBP12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Marc1Q9CW42 340 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Slxl1Q9D515 155 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Scgb2b7D3YYY1 112 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 1700024B05RikE9Q6D7 167 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gm5160F8VPN3 147 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 CkmP07310 381 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Gabrr2P56476 465 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Pdlim7Q3TJD7 457 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Nfe2l1Q61985 741 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Ints6lQ8BND4 861 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Nkiras1Q8CEC5 192 aa12.38□□□□□ -0.43
Ctr9-201ENSMUST00000005749 Haus3Q8QZX2 570 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms