RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 S100ZQ8WXG8 99 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 MRPL48Q96GC5 212 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 POLR3FQ9H1D9 316 aaPredicted RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 SERHL2Q9H4I8 314 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 TMEM8AQ9HCN3 771 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 SERHLQ9NQF3 203 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 KBTBD4Q9NVX7 518 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 COMMD8Q9NX08 183 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 GGA3Q9NZ52 723 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 R3HDM2Q9Y2K5 976 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 PKP3Q9Y446 797 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ATXN2Q99700 1313 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 DFFAO00273 331 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 RPLP2P05387 115 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 GZMAP12544 262 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ATP6V1B2P21281 511 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 POU4F1Q01851 419 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 FCHO2Q0JRZ9 810 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 TOP3AQ13472 1001 aaPredicted RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 ACAD10Q6JQN1 1059 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 TRIM65Q6PJ69 517 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 KRT74Q7RTS7 529 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 BNIPLQ7Z465 357 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 ZNF333Q96JL9 665 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 PARK7Q99497 189 aaKnown RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 C6orf62Q9GZU0 229 aaPredicted RBP9.02□□□□□ -0.97
PATJ-216ENST00000635214 VTI1BQ9UEU0 232 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 LRFN2Q9ULH4 789 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 PRR12Q9ULL5 1215 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 SLC30A1Q9Y6M5 507 aa9.02□□□□□ -0.97
PATJ-216ENST00000635214 RIPK2O43353 540 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 IDH3BO43837 385 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 PEX1O43933 1283 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 ZC3H11AO75152 810 aaKnown RBP eCLIP9.01□□□□□ -0.97
PATJ-216ENST00000635214 TNFRSF21O75509 655 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 IFNA14P01570 189 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 JAK1P23458 1154 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 COX10Q12887 443 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 CCNG2Q16589 344 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 KLHL17Q6TDP4 642 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 ATPAF2Q8N5M1 289 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 DCUN1D1Q96GG9 259 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SPATA17Q96L03 361 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 WRNIP1Q96S55 665 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 LACRTQ9GZZ8 138 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SIK2Q9H0K1 926 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 TCF7L2Q9NQB0 619 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SH3GLB1Q9Y371 365 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 RAD54BQ9Y620 910 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 MAGEB2O15479 319 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 UNC5CO95185 931 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 PGK2P07205 417 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 CPA3P15088 417 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 MAPK1P28482 360 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 PTPN7P35236 360 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SREBF1P36956 1147 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 NNMTP40261 264 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 MAGEA10P43363 369 aaPredicted RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 ARPP19P56211 112 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 ZNF280AP59817 542 aaPredicted RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 HERVK_113P62684 666 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 CDK16Q00536 496 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 ILF2Q12905 390 aaKnown RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 DDR2Q16832 855 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 CYP4A22Q5TCH4 519 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 BTBD8Q5XKL5 378 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 EXOC3L1Q86VI1 746 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 DHFR2Q86XF0 187 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 ZNF398Q8TD17 642 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 MAGEC3Q8TD91 643 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 PDGFDQ9GZP0 370 aaPredicted RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 AK5Q9Y6K8 562 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 F8W810 466 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 BGNP21810 368 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 CDH3P22223 829 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 AKT1P31749 480 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SOX11P35716 441 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 NCKAP1LP55160 1127 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 FBXW4P57775 412 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 XIAPP98170 497 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 NEDD8Q15843 81 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SNRNP35Q16560 246 aaKnown RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 CCDC33Q8N5R6 958 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 FAM71DQ8N9W8 422 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 PRCCQ92733 491 aaPredicted RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 NSMCE2Q96MF7 247 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SPON2Q9BUD6 331 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 MYLK2Q9H1R3 596 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 JPH1Q9HDC5 661 aaPredicted RBP9.01□□□□□ -0.97
PATJ-216ENST00000635214 THAP1Q9NVV9 213 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 CROTQ9UKG9 612 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 SHOC2Q9UQ13 582 aa9.01□□□□□ -0.97
PATJ-216ENST00000635214 RAD51BO15315 384 aa9□□□□□ -0.97
PATJ-216ENST00000635214 SMNDC1O75940 238 aaKnown RBP eCLIP9□□□□□ -0.97
PATJ-216ENST00000635214 SUPT7LO94864 414 aa9□□□□□ -0.97
PATJ-216ENST00000635214 SERPINE1P05121 402 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms