RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SEZ6Q53EL9 994 aa9□□□□□ -0.97
PDE6A-204ENST00000613228 RASGEF1CQ8N431 466 aa9□□□□□ -0.97
PDE6A-204ENST00000613228 SKA1Q96BD8 255 aa9□□□□□ -0.97
PDE6A-204ENST00000613228 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
PDE6A-204ENST00000613228 H0YC42 278 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 ASS1P00966 412 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 HARS2P49590 506 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 FMO1Q01740 532 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 TUBA3CQ13748 450 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 RABGAP1LQ5R372 815 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SPRYD7Q5W111 196 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 TERB1Q8NA31 727 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 FLCNQ8NFG4 579 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 CELF4Q9BZC1 486 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 C6orf203Q9P0P8 240 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 TFR2Q9UP52 801 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 FARP1Q9Y4F1 1045 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 CHN1P15882 459 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PTP4A2Q12974 167 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 MAMLD1Q13495 774 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 MAPRE2Q15555 327 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 RGS9BPQ6ZS82 235 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 RXFP2Q8WXD0 754 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 EFHD1Q9BUP0 239 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 NFKBIZQ9BYH8 718 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PHACTR1Q9C0D0 580 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SMARCAL1Q9NZC9 954 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF214Q9UL59 606 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 CDH9Q9ULB4 789 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 GMEB1Q9Y692 573 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 GOLGA8TH3BQL2 631 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 M0QYT0 321 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PIK3R2O00459 728 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 FAM163BP0C2L3 166 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SLC11A2P49281 568 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PPM1FP49593 454 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 USP4Q13107 963 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 RIPK1Q13546 671 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 RSPH1Q8WYR4 309 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 KAT2BQ92831 832 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 TTC17Q96AE7 1141 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 VAT1Q99536 393 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 CCT7Q99832 543 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 WWP1Q9H0M0 922 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 HSD3B7Q9H2F3 369 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SPATA7Q9P0W8 599 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 TRHDEQ9UKU6 1024 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 POLIQ9UNA4 740 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PTCH2Q9Y6C5 1203 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 TMEM150BA6NC51 233 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SMNDC1O75940 238 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 ALDH1A3P47895 512 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 AMPD2Q01433 879 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PEX5LQ8IYB4 626 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 KIF2BQ8N4N8 673 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 KLHL25Q9H0H3 589 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 MRPL46Q9H2W6 279 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 LRRC19Q9H756 370 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF229Q9UJW7 825 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PCDHGC3Q9UN70 934 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 LAMA4Q16363 1823 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 DNALI1O14645 258 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 C4BPAP04003 597 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PRMT2P55345 433 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 OTUD4Q01804 1114 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SHROOM1Q2M3G4 852 aaPredicted RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SLC35G1Q2M3R5 365 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 MDH1BQ5I0G3 518 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 B3GNT6Q6ZMB0 384 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 FAM71DQ8N9W8 422 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 BTBD6Q96KE9 485 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 PRMT1Q99873 361 aaKnown RBP8.99□□□□□ -0.97
PDE6A-204ENST00000613228 SYT17Q9BSW7 474 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
PDE6A-204ENST00000613228 WFS1O76024 890 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 GNRH1P01148 92 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 SERPINB1P30740 379 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ZNF143P52747 638 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ARFIP2P53365 341 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 OXCT1P55809 520 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 NUP107P57740 925 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 PTK7Q13308 1070 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 RRP1BQ14684 758 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ARHGAP15Q53QZ3 475 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 RARS2Q5T160 578 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 HERC6Q8IVU3 1022 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 PPP2R3CQ969Q6 453 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 NMD3Q96D46 503 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 OMA1Q96E52 524 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 DDX43Q9NXZ2 648 aaKnown RBP8.98□□□□□ -0.97
PDE6A-204ENST00000613228 KLK14Q9P0G3 267 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 PCDHB5Q9Y5E4 795 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 WNK3Q9BYP7 1800 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 APOC4-APOC2K7ER74 178 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 DPYSL4O14531 572 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 APOC2P02655 101 aa8.98□□□□□ -0.97
PDE6A-204ENST00000613228 ATP6V1C1P21283 382 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms