RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 USP6NLQ92738 828 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 E2F7Q96AV8 911 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 MYO18AQ92614 2054 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 STAU1O95793 577 aaKnown RBP20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 KITP10721 976 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 L1CAMP32004 1257 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 CCNFP41002 786 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 ACSBG2Q5FVE4 666 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 SESTD1Q86VW0 696 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 CDKL3Q8IVW4 592 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 MCUQ8NE86 351 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 ANKRD27Q96NW4 1050 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 ARHGEF4Q9NR80 690 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 RNF19AQ9NV58 838 aa20.94■□□□□ 0.94
SHKBP1-225ENST00000600733 KRT38O76015 456 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 STILQ15468 1287 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 KCNT2Q6UVM3 1135 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 NDUFAF2Q8N183 169 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 TTC39CQ8N584 583 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 GSDMBQ8TAX9 411 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 MICAL1Q8TDZ2 1067 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 WDR60Q8WVS4 1066 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 LRRC39Q96DD0 335 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 C7orf26Q96N11 449 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 ZMAT2Q96NC0 199 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 EBNA1BP2Q99848 306 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 C20orf27Q9GZN8 174 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 DPEP3Q9H4B8 488 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 SIRPGQ9P1W8 387 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 MFHAS1Q9Y4C4 1052 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 BLMHQ13867 455 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 RCN1Q15293 331 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 TEX44Q53QW1 395 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 ARMCX2Q7L311 632 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 NUDCD3Q8IVD9 361 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 UNC5BQ8IZJ1 945 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 HESX1Q9UBX0 185 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 PLXNA1Q9UIW2 1896 aa20.93■□□□□ 0.94
SHKBP1-225ENST00000600733 FAM159BA6NKW6 160 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 KIF1CO43896 1103 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 SMNDC1O75940 238 aaKnown RBP eCLIP20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 KRT36O76013 467 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 RARBP10826 455 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 OCRLQ01968 901 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 KYAT1Q16773 422 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 MDH1BQ5I0G3 518 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 TREML1Q86YW5 311 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 C7orf31Q8N865 590 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 FBXO27Q8NI29 283 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 AFG1LQ8WV93 481 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 KCNK4Q9NYG8 393 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 A6NJR5 290 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 GCATO75600 419 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 LUC7L3O95232 432 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 LMNAP02545 664 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 DPYSL2Q16555 572 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 ATG16L1Q676U5 607 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 MTHFD1LQ6UB35 978 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 ZCCHC23Q6ZST2 131 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 ERO1BQ86YB8 467 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 MTMR10Q9NXD2 777 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 SLC17A6Q9P2U8 582 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 TUBGCP4Q9UGJ1 667 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 AP4E1Q9UPM8 1137 aa20.92■□□□□ 0.94
SHKBP1-225ENST00000600733 IREB2P48200 963 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 IRX4P78413 519 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 CRADDP78560 199 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 GLRA4Q5JXX5 417 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 DENND5BQ6ZUT9 1274 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 SULF1Q8IWU6 871 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 TEX9Q8N6V9 391 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 CCDC185Q8N715 623 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 OR6B3Q8NGW1 331 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 DEPDC1BQ8WUY9 529 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 MTBPQ96DY7 904 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 PPARGC1AQ9UBK2 798 aaKnown RBP20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 GINS2Q9Y248 185 aa20.91■□□□□ 0.94
SHKBP1-225ENST00000600733 ENO1P06733 434 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 ATP6V1C1P21283 382 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 SOWAHAQ2M3V2 549 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 TRIM42Q8IWZ5 723 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 NETO2Q8NC67 525 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 C18orf25Q96B23 403 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 CSPG4P5Q96PW8 444 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 KCTD15Q96SI1 283 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 PIH1D1Q9NWS0 290 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 MKS1Q9NXB0 559 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 SNTG2Q9NY99 539 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 PCDHA11Q9Y5I1 949 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 CAPN14A8MX76 684 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 H3BRJ5 948 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 NPTXRO95502 500 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 GSTA2P09210 222 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 LCP1P13796 627 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 CCDC130P13994 396 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 DESP17661 470 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 TPSB2P20231 275 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 ADORA2AP29274 412 aa20.9■□□□□ 0.94
SHKBP1-225ENST00000600733 GRM5P41594 1212 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms