RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 J3KTA2 159 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 CBFA2T3O75081 653 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 MORC3Q14149 939 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 AASDHQ4L235 1098 aaPredicted RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 TMEM65Q6PI78 240 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 MYLK4Q86YV6 388 aaPredicted RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 FAM71DQ8N9W8 422 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 PNLDC1Q8NA58 520 aaKnown RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 MAFAQ8NHW3 353 aaPredicted RBP5.13□□□□□ -1.59
NF1-220ENST00000581113 HASPINQ8TF76 798 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 POF1BQ8WVV4 589 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 CCDC17Q96LX7 622 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 ASIC5Q9NY37 505 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 IGSF9Q9P2J2 1179 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 RIPOR2Q9Y4F9 1068 aa5.13□□□□□ -1.59
NF1-220ENST00000581113 ARHGEF11O15085 1522 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 WDR97A6NE52 1622 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 SNAPC4Q5SXM2 1469 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 COL11A2P13942 1736 aaPredicted RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 USP1O94782 785 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 MT-CO3P00414 261 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 APEHP13798 732 aaKnown RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 GSTM5P46439 218 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 DGKQP52824 942 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 NHLH1Q02575 133 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 TFF2Q03403 129 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 CCDC15Q0P6D6 951 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 CHAF1AQ13111 956 aaPredicted RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 PROSER3Q2NL68 480 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 PGBD2Q6P3X8 592 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 TLDC1Q6P9B6 456 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 TTC30AQ86WT1 665 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 CHSY1Q86X52 802 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 C12orf76Q8N812 135 aaPredicted RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.12□□□□□ -1.59
NF1-220ENST00000581113 PRR11Q96HE9 360 aaPredicted RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 FYTTD1Q96QD9 318 aaKnown RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 EIF3CQ99613 913 aaKnown RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 PRPF18Q99633 342 aaKnown RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 CINPQ9BW66 212 aaPredicted RBP5.12□□□□□ -1.59
NF1-220ENST00000581113 SAP30LQ9HAJ7 183 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 HELLSQ9NRZ9 838 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 CA14Q9ULX7 337 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 VPS4AQ9UN37 437 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 DTNAQ9Y4J8 743 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 PCDHB2Q9Y5E7 798 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 COMMD10Q9Y6G5 202 aa5.12□□□□□ -1.59
NF1-220ENST00000581113 GRIN2BQ13224 1484 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 PNMA6EA0A0J9YXQ4 647 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 TCRBV5S1A1TA0A578 114 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 AQP12BA6NM10 295 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 LINC01548A6NM66 108 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 PRAMEF2O60811 474 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 TMIGD3P0DMS9 266 aaPredicted RBP5.11□□□□□ -1.59
NF1-220ENST00000581113 GPC5P78333 572 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 CFHR3Q02985 330 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 KCNB1Q14721 858 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 MFSD13AQ14CX5 517 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 FAM187BQ17R55 369 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 CERKLQ49MI3 558 aaPredicted RBP5.11□□□□□ -1.59
NF1-220ENST00000581113 C10orf62Q5T681 223 aaPredicted RBP5.11□□□□□ -1.59
NF1-220ENST00000581113 PTF1AQ7RTS3 328 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 ADAMTS18Q8TE60 1221 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 EDC3Q96F86 508 aaKnown RBP5.11□□□□□ -1.59
NF1-220ENST00000581113 RITA1Q96K30 269 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 NUDT22Q9BRQ3 303 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 VPS45Q9NRW7 570 aa5.11□□□□□ -1.59
NF1-220ENST00000581113 MAGI1Q96QZ7 1491 aaPredicted RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 GOLGA6L3A6NEY3 463 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 TISP43B9A030 160 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 POC1B-GALNT4F8VUJ3 575 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 PCDH17O14917 1159 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 ASNA1O43681 348 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 SKAP2O75563 359 aaPredicted RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 GLP2RO95838 553 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 PRKCGP05129 697 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 GALNSP34059 522 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 ALDH18A1P54886 795 aaKnown RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 TUBA4AP68366 448 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 SEMA3BQ13214 749 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 DNASE1L3Q13609 305 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 KCNJ12Q14500 433 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 SPARCL1Q14515 664 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 PUM3Q15397 648 aaKnown RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 AWAT1Q58HT5 328 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 ZNF782Q6ZMW2 699 aaPredicted RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 DCDC5Q6ZRR9 648 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 CLASRPQ8N2M8 674 aaKnown RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 GALNT4Q8N4A0 578 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 LINC01465Q8N7H1 131 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 SEMA6DQ8NFY4 1073 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 PMM1Q92871 262 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 ZNF764Q96H86 408 aaPredicted RBP5.1□□□□□ -1.59
NF1-220ENST00000581113 ASB2Q96Q27 587 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 TMEM8AQ9HCN3 771 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 OBP2BQ9NPH6 170 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 FSCN3Q9NQT6 498 aa5.1□□□□□ -1.59
NF1-220ENST00000581113 CHD1O14646 1710 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms