RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 EIF2B4Q9UI10 523 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SMC3Q9UQE7 1217 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CDK4P11802 303 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 HLA-EP13747 358 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CHKAP35790 457 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 STAT6P42226 847 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CDH8P55286 799 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 EIF4HQ15056 248 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 RABEP1Q15276 862 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TMPRSS12Q86WS5 348 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CCDC127Q96BQ5 260 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TMX3Q96JJ7 454 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FGFBP2Q9BYJ0 223 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 OSGEPQ9NPF4 335 aa12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-216ENST00000579853 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 KCNJ18B7U540 433 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PCDHGA12O60330 932 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 DFNA5O60443 496 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PHACTR2O75167 634 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 HNF1BP35680 557 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PSEN1P49768 467 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CCT8P50990 548 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 AP3M2P53677 418 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 MYL6P60660 151 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 BNC1Q01954 994 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CYP24A1Q07973 514 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PTPRNQ16849 979 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZNF667Q5HYK9 610 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 LRRC69Q6ZNQ3 347 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PAQR9Q6ZVX9 377 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 IGSF8Q969P0 613 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 NXPE2Q96DL1 559 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CDK5RAP1Q96SZ6 601 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 DCLK3Q9C098 648 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 XYLT2Q9H1B5 865 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CSNK1G1Q9HCP0 422 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SCML2Q9UQR0 700 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CAPN8A6NHC0 703 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ATXN7O15265 892 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TIMM44O43615 452 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CLSTN1O94985 981 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TBX18O95935 607 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 NEFLP07196 543 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 P4HA1P13674 534 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 IL12RB1P42701 662 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 GRIA4P48058 902 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 MFAP3P55082 362 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZNF699Q32M78 642 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 Q6ZNB5 142 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ANKS1BQ7Z6G8 1248 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZNF276Q8N554 614 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SMYD3Q9H7B4 428 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 AGPAT3Q9NRZ7 376 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PLK2Q9NYY3 685 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CAPN9O14815 690 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 RRP8O43159 456 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZIC2O95409 532 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CYBBP04839 570 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 EPHX1P07099 455 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 COPAP53621 1224 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 COG7P83436 770 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 AMPD3Q01432 767 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ARID5AQ03989 594 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 BIRC3Q13489 604 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 BMT2Q1RMZ1 405 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 KIF19Q2TAC6 998 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 C10orf120Q5SQS8 335 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 C6orf118Q5T5N4 469 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 UNC93AQ86WB7 457 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZMIZ2Q8NF64 920 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SLC2A14Q8TDB8 520 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SNX19Q92543 992 aa12.84□□□□□ -0.35
CDK5RAP3-216ENST00000579853 BHMTQ93088 406 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms