RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 POLD2P49005 469 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 SLC11A2P49281 568 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PRKAA2P54646 552 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 WNT3AP56704 352 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 NOMO3P69849 1222 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 GSTO1P78417 241 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 MXRA7P84157 204 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PRR5P85299 388 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ERV3-1Q14264 604 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 NR1I3Q14994 352 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 CDC37Q16543 378 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 LRIT3Q3SXY7 679 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PABPC1LQ4VXU2 614 aaKnown RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 VWA3BQ502W6 1294 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ZMYM1Q5SVZ6 1142 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 UBXN11Q5T124 520 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 TREML2Q5T2D2 321 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 TMTC4Q5T4D3 741 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 SLC9C2Q5TAH2 1124 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 DCAF12L1Q5VU92 463 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ZKSCAN2Q63HK3 967 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ETV3LQ6ZN32 361 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 FAM43BQ6ZT52 329 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ANKS1BQ7Z6G8 1248 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 SLC44A2Q8IWA5 706 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 SLC15A4Q8N697 577 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ANKRD13CQ8N6S4 541 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 DTX3Q8N9I9 347 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 IL17RDQ8NFM7 739 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 STON2Q8WXE9 905 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 SPSB4Q96A44 273 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ZNF775Q96BV0 537 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 MISP3Q96FF7 219 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ZMAT2Q96NC0 199 aaKnown RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 TRAPPC9Q96Q05 1148 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 RTKNQ9BST9 563 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 GPR63Q9BZJ6 419 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PCDHAC1Q9H158 963 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 TP63Q9H3D4 680 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 SLAMF7Q9NQ25 335 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 HEYLQ9NQ87 328 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 DDX4Q9NQI0 724 aaKnown RBP3.53□□□□□ -1.84
CNOT1-221ENST00000569924 DLL4Q9NR61 685 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 TLR9Q9NR96 1032 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PLSCR4Q9NRQ2 329 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 CFAP97Q9P2B7 532 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ARHGAP20Q9P2F6 1191 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 MORF4L1Q9UBU8 362 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 MID2Q9UJV3 735 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 DTNAQ9Y4J8 743 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 ACTL7AQ9Y615 435 aa3.53□□□□□ -1.84
CNOT1-221ENST00000569924 PLXNB2O15031 1838 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 B4DLN1 442 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 C19orf81C9J6K1 198 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 H0Y3Z8 333 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 MYO1CO00159 1063 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 GSC2O15499 205 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 DNAJB5O75953 348 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 USP1O94782 785 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 GNAI2P04899 355 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SLC3A2P08195 630 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 HNRNPA1P09651 372 aaKnown RBP eCLIP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 CKBP12277 381 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 AKR1B1P15121 316 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 RXRAP19793 462 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 FPR1P21462 350 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ADORA1P30542 326 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 HOXA7P31268 230 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 HK2P52789 917 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 HMGCS2P54868 508 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 BACE1P56817 501 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TIMM10P62072 90 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 MECOMQ03112 1051 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SLFN5Q08AF3 891 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SCAPQ12770 1279 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SPP2Q13103 211 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 MTX1Q13505 466 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SLC29A2Q14542 456 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 MVPQ14764 893 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TARBP2Q15633 366 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TSTQ16762 297 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ATPAF1Q5TC12 328 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 RAP1GAP2Q684P5 730 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TMEM200BQ69YZ2 307 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ZNF787Q6DD87 383 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 NFRKBQ6P4R8 1299 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 CRTC1Q6UUV9 634 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TMC5Q6UXY8 1006 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ALYREFQ86V81 257 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 PLXDC1Q8IUK5 500 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 NRSN1Q8IZ57 195 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TRMT2AQ8IZ69 625 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 CNPY4Q8N129 248 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 LILRA2Q8N149 483 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TMEM57Q8N5G2 664 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 LILRA3Q8N6C8 439 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms