RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 COLGALT2Q8IYK4 626 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 SNF8Q96H20 258 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 PIWIL1Q96J94 861 aaKnown RBP15.22■□□□□ 0.03
COMMD4-221ENST00000567935 CCDC114Q96M63 670 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 CNTNAP3BQ96NU0 1288 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 SAMD11Q96NU1 681 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 LPIN3Q9BQK8 851 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 PAAF1Q9BRP4 392 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
COMMD4-221ENST00000567935 CNTNAP3Q9BZ76 1288 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 FOXP3Q9BZS1 431 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 PLEKHA4Q9H4M7 779 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 ZDHHC18Q9NUE0 388 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 GRHL1Q9NZI5 618 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 PCSK1NQ9UHG2 260 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 SNX24Q9Y343 169 aa15.22■□□□□ 0.03
COMMD4-221ENST00000567935 KMT2BQ9UMN6 2715 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-221ENST00000567935 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 LOC730098B7Z3J9 87 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 APOC4-APOC2K7ER74 178 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 PIK3R2O00459 728 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 LINC01565O15544 149 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 GALR2O43603 387 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 APOC2P02655 101 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 FAM153BP0C7A2 387 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 KRT10P13645 584 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 ATF2P15336 505 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 RDXP35241 583 aaKnown RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 KCNJ1P48048 391 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 AIF1P55008 147 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 YWHAZP63104 245 aaKnown RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 YWHAHQ04917 246 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 RNASELQ05823 741 aaKnown RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 SNX1Q13596 522 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 IKBKEQ14164 716 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 KRT81Q14533 505 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 SLMAPQ14BN4 828 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 C15orf59Q2T9L4 293 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 SMTNL2Q2TAL5 461 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 FAM153CQ494X1 144 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 KIAA0319Q5VV43 1072 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 BEND5Q7L4P6 421 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 DDX42Q86XP3 938 aaKnown RBP eCLIP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 IQCKQ8N0W5 287 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 DBF4BQ8NFT6 615 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 SLC35B2Q8TB61 432 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 ATG4AQ8WYN0 398 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 ART4Q93070 314 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 CFAP57Q96MR6 1250 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 SLC2A13Q96QE2 648 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 PKMYT1Q99640 499 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 RTP3Q9BQQ7 232 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 ZNF670Q9BS34 389 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 OXCT2Q9BYC2 517 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 TRIM31Q9BZY9 425 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 DMAP1Q9NPF5 467 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 KLHL11Q9NVR0 708 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 RCOR3Q9P2K3 495 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 CACNG4Q9UBN1 327 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 ASIC3Q9UHC3 531 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 FAM153AQ9UHL3 310 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 CD207Q9UJ71 328 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 LRFN2Q9ULH4 789 aa15.21■□□□□ 0.03
COMMD4-221ENST00000567935 R3HDM2Q9Y2K5 976 aaKnown RBP15.21■□□□□ 0.03
COMMD4-221ENST00000567935 EPG5Q9HCE0 2579 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 CLDN5O00501 218 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 CST8O60676 142 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 EFCAB14O75071 495 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 GRAP2O75791 330 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ZNF189O75820 626 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 OAZ2O95190 189 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ZFXP17010 805 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 OAS2P29728 719 aaKnown RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 BRCC3P46736 316 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 RPL21P46778 160 aaKnown RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 TKTL1P51854 596 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 CDH6P55285 790 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 HDAC4P56524 1084 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 MAP3K7CLP57077 242 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ATP11AP98196 1134 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 TRADDQ15628 312 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 OASLQ15646 514 aaKnown RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 DPYSL2Q16555 572 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 CDO1Q16878 200 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ERMARDQ5T6L9 678 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ZDHHC24Q6UX98 284 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 CYP4V2Q6ZWL3 525 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 TMC3Q7Z5M5 1100 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 ANKS1BQ7Z6G8 1248 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 RFX6Q8HWS3 928 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 DCP1BQ8IZD4 617 aaKnown RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 HSPH1Q92598 858 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 NT5C3BQ969T7 300 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 MYLPFQ96A32 169 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 FAM149B1Q96BN6 582 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 GDAP1L1Q96MZ0 367 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 PEBP4Q96S96 227 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms