RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 TIMM44O43615 452 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 SEMA4FO95754 770 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 ITGB3P05106 788 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 MPOP05164 745 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 PDGFRBP09619 1106 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 IRF1P10914 325 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 LMO2P25791 158 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 COPAP53621 1224 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 GRIN1Q05586 938 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 POSTNQ15063 836 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 CCDC142Q17RM4 750 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 SOWAHAQ2M3V2 549 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 SNX30Q5VWJ9 437 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 KIAA1614Q5VZ46 1190 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 FBXO18Q8NFZ0 1043 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 MYCBPAPQ8TBZ2 947 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 FBXO32Q969P5 355 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 ARHGAP9Q9BRR9 750 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 TRIM9Q9C026 710 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 LHX5Q9H2C1 402 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 POLR1BQ9H9Y6 1135 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 SGK2Q9HBY8 427 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 LSM7Q9UK45 103 aaKnown RBP9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 SLC27A6Q9Y2P4 619 aa9.57□□□□□ -0.88
VPS9D1-205ENST00000565452 TEP1Q99973 2627 aaKnown RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 DOPEY2Q9Y3R5 2298 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 MUC22E2RYF6 1773 aaPredicted RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ANKRD63C9JTQ0 380 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 HCRTO43612 131 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 EPHX1P07099 455 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 KRT19P08727 400 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 MYF5P13349 255 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ACP1P24666 158 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 GNL1P36915 607 aaPredicted RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 TUBP50607 506 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 PSMC1P62191 440 aaKnown RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 GABREP78334 506 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ARID5AQ03989 594 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ZBTB16Q05516 673 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 GOLGA8FQ08AF8 430 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 GOLGA8DPQ0D2H9 430 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ST3GAL1Q11201 340 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 IFRD2Q12894 506 aaPredicted RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ZRSR1Q15695 479 aaKnown RBP9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 TTC38Q5R3I4 469 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 SLC39A4Q6P5W5 647 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 LAYNQ6UX15 382 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 C4orf32Q8N8J7 132 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 EXD3Q8N9H8 876 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 OR2T3Q8NH03 318 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 PCED1BQ96HM7 432 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 C8orf76Q96K31 380 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 CRTAC1Q9NQ79 661 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 GDF3Q9NR23 364 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 STARD5Q9NSY2 213 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ELOVL2Q9NXB9 296 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ITGA11Q9UKX5 1188 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 ODF2LQ9ULJ1 636 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 PAXBP1Q9Y5B6 917 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 STYXL1Q9Y6J8 313 aa9.56□□□□□ -0.88
VPS9D1-205ENST00000565452 NPHP3-ACAD11A0A0J9YXS1 232 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 K7ENM7 598 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 JAK2O60674 1132 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 USP12O75317 370 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 DNTTP04053 509 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 PLA2G4BP0C869 781 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 CR2P20023 1033 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 GJB2P29033 226 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 RBMS1P29558 406 aaKnown RBP9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 CCR10P46092 362 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 RXRGP48443 463 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 FOSBP53539 338 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 ASIC1P78348 528 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 SHBQ15464 509 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 ARL13BQ3SXY8 428 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 HS1BP3Q53T59 392 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 MDH1BQ5I0G3 518 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 CRELD2Q6UXH1 353 aaPredicted RBP9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 KCNK18Q7Z418 384 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 C1orf127Q8N9H9 656 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 WBP2Q969T9 261 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 VCPIP1Q96JH7 1222 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 DEPDC7Q96QD5 511 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 FOXP1Q9H334 677 aaPredicted RBP9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 CCSER2Q9H7U1 834 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 COMMD8Q9NX08 183 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 NCKAP1Q9Y2A7 1128 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 PTPRJQ12913 1337 aa9.55□□□□□ -0.88
VPS9D1-205ENST00000565452 MYOFQ9NZM1 2061 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 A0A1W2PPC4 97 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 FAM13AO94988 1023 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 PTPN1P18031 435 aaKnown RBP9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 CD38P28907 300 aa9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 ATP5C1P36542 298 aaKnown RBP9.54□□□□□ -0.88
VPS9D1-205ENST00000565452 TRAPPC10P48553 1259 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms