RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 MYL6P60660 151 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 AMPD2Q01433 879 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CYP27A1Q02318 531 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CREB5Q02930 508 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CYP24A1Q07973 514 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TAF10Q12962 218 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 MYO1EQ12965 1108 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 KCNB1Q14721 858 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 PSMD6Q15008 389 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 DHCR24Q15392 516 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CRY1Q16526 586 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 SNRNP35Q16560 246 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 DUOXA2Q1HG44 320 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 C2orf27AQ580R0 203 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 MDH1BQ5I0G3 518 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 PMS2CLQ68D20 193 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 IL31Q6EBC2 164 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 C4orf50Q6ZRC1 276 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 ZNF295-AS1Q8N0V1 137 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 KIAA1958Q8N8K9 716 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 C12orf50Q8NA57 414 aaPredicted RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 IL17RCQ8NAC3 791 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TTC16Q8NEE8 873 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 NOC3LQ8WTT2 800 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 RLN3Q8WXF3 142 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 DDX1Q92499 740 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 ELMO3Q96BJ8 720 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 P2RY11Q96G91 374 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 ANKRD36BP1Q96IX9 119 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CNOT6LQ96LI5 555 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 CEP295NLQ96MC4 621 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 FNBP1Q96RU3 617 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 KCNK16Q96T55 309 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CGRRF1Q99675 332 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 SLC30A3Q99726 388 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TPSD1Q9BZJ3 242 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 ZNF518BQ9C0D4 1074 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 SDCBP2Q9H190 292 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TNMDQ9H2S6 317 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CD248Q9HCU0 757 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 ZDHHC4Q9NPG8 344 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 VPS45Q9NRW7 570 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 SMPD4Q9NXE4 827 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 IL37Q9NZH6 218 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 TFIP11Q9UBB9 837 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 MBD1Q9UIS9 605 aaPredicted RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 RALYQ9UKM9 306 aaKnown RBP6.17□□□□□ -1.42
USP3-215ENST00000559771 MMP17Q9ULZ9 603 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CPQQ9Y646 472 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CEP295Q9C0D2 2601 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CEP192Q8TEP8 1941 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 ADAMTS9Q9P2N4 1935 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 PCDH15Q96QU1 1955 aa6.17□□□□□ -1.42
USP3-215ENST00000559771 CNOT1A5YKK6 2376 aaKnown RBP6.16□□□□□ -1.42
USP3-215ENST00000559771 FAM92AA1XBS5 289 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 C4orf47A7E2U8 309 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 TRIM24O15164 1050 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CLIC2O15247 247 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 EIF3DO15371 548 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP3-215ENST00000559771 COCHO43405 550 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 BEST1O76090 585 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 VNN1O95497 513 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 NFATC1O95644 943 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CAVIN2O95810 425 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 TNNC2P02585 160 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 ZDHHC11BP0C7U3 371 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 DLATP10515 647 aaKnown RBP6.16□□□□□ -1.42
USP3-215ENST00000559771 PFKLP17858 780 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 PDCP20941 246 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 GNL1P36915 607 aaPredicted RBP6.16□□□□□ -1.42
USP3-215ENST00000559771 TXLNAP40222 546 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CASP4P49662 377 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 DGKEP52429 567 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CDH8P55286 799 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 RAC1P63000 192 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CLDN10P78369 228 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 IRX4P78413 519 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 PSMD2Q13200 908 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 SURF1Q15526 300 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 BMT2Q1RMZ1 405 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 SKOR2Q2VWA4 1001 aaPredicted RBP6.16□□□□□ -1.42
USP3-215ENST00000559771 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 WDR72Q3MJ13 1102 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 SAMD5Q5TGI4 173 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 SNX30Q5VWJ9 437 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 ANO7Q6IWH7 933 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 PSAPL1Q6NUJ1 521 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CLEC17AQ6ZS10 378 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 MIB1Q86YT6 1006 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 ETFBKMTQ8IXQ9 262 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 C12orf56Q8IXR9 622 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CCDC65Q8IXS2 484 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 ALLCQ8N6M5 410 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 FSIP1Q8NA03 581 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 TXNDC5Q8NBS9 432 aaKnown RBP6.16□□□□□ -1.42
USP3-215ENST00000559771 ZMIZ2Q8NF64 920 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms