RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 AARSP49588 968 aaKnown RBP eCLIP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 DGKEP52429 567 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 TAP2Q03519 686 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 GPS1Q13098 491 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 E2F2Q14209 437 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 KCNAB1Q14722 419 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 RAP1GAP2Q684P5 730 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 CLEC4GQ6UXB4 293 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 RSRC2Q7L4I2 434 aaKnown RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 MOGAT3Q86VF5 341 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 POC1BQ8TC44 478 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 WDR60Q8WVS4 1066 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 RSC1A1Q92681 617 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 RPL36ALQ969Q0 106 aaKnown RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 PPP2R3CQ969Q6 453 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 SEC62Q99442 399 aaKnown RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 RTKNQ9BST9 563 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 PTDSS2Q9BVG9 487 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 TP63Q9H3D4 680 aaPredicted RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 RIC8AQ9NPQ8 531 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 DNMT3BQ9UBC3 853 aaKnown RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 DNAJB11Q9UBS4 358 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 SRP68Q9UHB9 627 aaKnown RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 SLC13A4Q9UKG4 626 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 BTBD3Q9Y2F9 522 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 CRYL1Q9Y2S2 319 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 LATS1O95835 1130 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 HSP90AA1P07900 732 aaKnown RBP4.94□□□□□ -1.62
PRPF39-210ENST00000556718 MST1P26927 711 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 MPGP29372 298 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 PTGER1P34995 402 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 ADD2P35612 726 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 BCAT1P54687 386 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 GPR162Q16538 588 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 LIN54Q6MZP7 749 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 TMEM108Q6UXF1 575 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 ZNF66Q6ZN08 573 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 RAB11FIP2Q7L804 512 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 KCTD20Q7Z5Y7 419 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 LRRTM4Q86VH4 590 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 ZNF280BQ86YH2 543 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 SLC44A2Q8IWA5 706 aaPredicted RBP4.94□□□□□ -1.62
PRPF39-210ENST00000556718 ABHD5Q8WTS1 349 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 THAP4Q8WY91 577 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 SDCCAG3Q96C92 435 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 FAM227BQ96M60 508 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 NELL2Q99435 816 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 SLC26A6Q9BXS9 759 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 TMX4Q9H1E5 349 aaPredicted RBP4.94□□□□□ -1.62
PRPF39-210ENST00000556718 TAF1DQ9H5J8 278 aaPredicted RBP4.94□□□□□ -1.62
PRPF39-210ENST00000556718 MRPS18AQ9NVS2 196 aaKnown RBP4.94□□□□□ -1.62
PRPF39-210ENST00000556718 SCAF8Q9UPN6 1271 aaKnown RBP4.94□□□□□ -1.62
PRPF39-210ENST00000556718 DTNAQ9Y4J8 743 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 ZNF521Q96K83 1311 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 ADGRA2Q96PE1 1338 aa4.94□□□□□ -1.62
PRPF39-210ENST00000556718 A0A0B4J269 797 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 DNPH1O43598 174 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 TRIAP1O43715 76 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 NTSR2O95665 410 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 RHOP08100 348 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 KCNA3P22001 575 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 PPIFP30405 207 aaKnown RBP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 AKT1P31749 480 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 KRT9P35527 623 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 NDUFV1P49821 464 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 MTHFSP49914 203 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 ANXA11P50995 505 aaKnown RBP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 MYO1EQ12965 1108 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 G3BP1Q13283 466 aaKnown RBP eCLIP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 ATP1A4Q13733 1029 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 BOP1Q14137 746 aaKnown RBP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 EFR3AQ14156 821 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 FAM153CQ494X1 144 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 CERCAMQ5T4B2 595 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 ARHGAP40Q5TG30 622 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 RINT1Q6NUQ1 792 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 SUGP1Q8IWZ8 645 aaKnown RBP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 SLC15A3Q8IY34 581 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 OR6Y1Q8NGX8 325 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 AFG1LQ8WV93 481 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 TRAPPC9Q96Q05 1148 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 TRIM5Q9C035 493 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 PABPC3Q9H361 631 aaKnown RBP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 EPS8L2Q9H6S3 715 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 MLXIPQ9HAP2 919 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 WASH6PQ9NQA3 447 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 MAP3K20Q9NYL2 800 aaKnown RBP4.93□□□□□ -1.62
PRPF39-210ENST00000556718 TMEM98Q9Y2Y6 226 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 SPATA31A3Q5VYP0 1347 aa4.93□□□□□ -1.62
PRPF39-210ENST00000556718 PNMA6EA0A0J9YXQ4 647 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 EFCAB8A8MWE9 144 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 F5H697 171 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 hCG_1984214I3L0E3 225 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ZSCAN9O15535 394 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-210ENST00000556718 FAM155BO75949 473 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 URI1O94763 535 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-210ENST00000556718 HNRNPCP07910 306 aaKnown RBP eCLIP4.92□□□□□ -1.62
PRPF39-210ENST00000556718 ANXA6P08133 673 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 CNTFP26441 200 aa4.92□□□□□ -1.62
PRPF39-210ENST00000556718 EPHB2P29323 1055 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms