RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 TMEM25Q86YD3 366 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 MIB1Q86YT6 1006 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 FUKQ8N0W3 1084 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 OLIG1Q8TAK6 271 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 PARD3BQ8TEW8 1205 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 VRTNQ9H8Y1 702 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 HMGXB4Q9UGU5 601 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 SERTAD1Q9UHV2 236 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 MBD1Q9UIS9 605 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-208ENST00000553370 PCDHA7Q9UN72 937 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 PCDHA5Q9Y5H7 936 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 PCDH15Q96QU1 1955 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 C1QTNF9BB2RNN3 333 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 HLA-DRAP01903 254 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SYPP08247 313 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SLFN14P0C7P3 912 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 C1QTNF9P0C862 333 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 RALAP11233 206 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 GNSP15586 552 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 GABRG2P18507 467 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SLC8A3P57103 927 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SIM1P81133 766 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-208ENST00000553370 MAP7D1Q3KQU3 841 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SYCP2LQ5T4T6 812 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SNX30Q5VWJ9 437 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SPOPLQ6IQ16 392 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 RETREG3Q86VR2 466 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 ETFBKMTQ8IXQ9 262 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 FRMD1Q8N878 549 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 C12orf29Q8N999 325 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 UCMAQ8WVF2 138 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 ZFRQ96KR1 1074 aaKnown RBP10.44□□□□□ -0.74
ACTN1-208ENST00000553370 HSPA12BQ96MM6 686 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 CDK5RAP1Q96SZ6 601 aaKnown RBP10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SMOQ99835 787 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 NT5C1AQ9BXI3 368 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SDCBP2Q9H190 292 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SUSD2Q9UGT4 822 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 RASAL2Q9UJF2 1139 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SLC6A14Q9UN76 642 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 PCDHB9Q9Y5E1 797 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 BAHCC1Q9P281 2608 aa10.44□□□□□ -0.74
ACTN1-208ENST00000553370 SPAARA0A1B0GVQ0 90 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 A0A1W2PQH9 124 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 TMEM8BA6NDV4 472 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PDXKO00764 312 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 CDX4O14627 284 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-208ENST00000553370 MDM4O15151 490 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 CACNG3O60359 315 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 SYNCRIPO60506 623 aaKnown RBP10.43□□□□□ -0.74
ACTN1-208ENST00000553370 VNN1O95497 513 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 TBX18O95935 607 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 CYBBP04839 570 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 HMBSP08397 361 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 RARGP13631 454 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 NR2F2P24468 414 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 ASPAP45381 313 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 VAMP7P51809 220 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 DLG4P78352 724 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 ZNF33AQ06730 810 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 EHHADHQ08426 723 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 STK4Q13043 487 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 E2F5Q15329 346 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PLEKHG6Q3KR16 790 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 ZACNQ401N2 412 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 WDR45BQ5MNZ6 344 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 ATL3Q6DD88 541 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 SLC23A3Q6PIS1 610 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PHTF2Q8N3S3 785 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 MINDY1Q8N5J2 469 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 TRIML1Q8N9V2 468 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 KIAA0895Q8NCT3 520 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PLEKHO2Q8TD55 490 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 IPO4Q8TEX9 1081 aaKnown RBP10.43□□□□□ -0.74
ACTN1-208ENST00000553370 ZCCHC14Q8WYQ9 949 aaKnown RBP10.43□□□□□ -0.74
ACTN1-208ENST00000553370 CYFIP2Q96F07 1278 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 SCNM1Q9BWG6 230 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 NIF3L1Q9GZT8 377 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 FSCN3Q9NQT6 498 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 CACNA2D2Q9NY47 1150 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PLK2Q9NYY3 685 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 USP25Q9UHP3 1055 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PILRBQ9UKJ0 227 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 NUDT5Q9UKK9 219 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 ZMIZ1Q9ULJ6 1067 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 STRIP2Q9ULQ0 834 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 SCML2Q9UQR0 700 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 RAD54BQ9Y620 910 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 PTPRBP23467 1997 aa10.43□□□□□ -0.74
ACTN1-208ENST00000553370 NYNRINQ9P2P1 1898 aaKnown RBP10.42□□□□□ -0.74
ACTN1-208ENST00000553370 DMXL2Q8TDJ6 3036 aa10.42□□□□□ -0.74
ACTN1-208ENST00000553370 A0A0A0MRY4 1105 aa10.42□□□□□ -0.74
ACTN1-208ENST00000553370 A0A1B0GVL5 298 aa10.42□□□□□ -0.74
ACTN1-208ENST00000553370 IKBKBO14920 756 aa10.42□□□□□ -0.74
ACTN1-208ENST00000553370 TRIM24O15164 1050 aa10.42□□□□□ -0.74
ACTN1-208ENST00000553370 HYAL3O43820 417 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-208ENST00000553370 BEST1O76090 585 aa10.42□□□□□ -0.74
ACTN1-208ENST00000553370 ASS1P00966 412 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms