RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 ZNF518BQ9C0D4 1074 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 MTMR12Q9C0I1 747 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 ELOVL4Q9GZR5 314 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 PDE11AQ9HCR9 933 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 TM9SF3Q9HD45 589 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 INTS13Q9NVM9 706 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 RBAKQ9NYW8 714 aaPredicted RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 DNMT3LQ9UJW3 386 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 SLC27A6Q9Y2P4 619 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 ZDHHC9Q9Y397 364 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 VWA3AA6NCI4 1184 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 CLDN5O00501 218 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 NPC1O15118 1278 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 TACC1O75410 805 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 CDK4P11802 303 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 GARTP22102 1010 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 HNF1BP35680 557 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 GNL1P36915 607 aaPredicted RBP12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 IL12RB1P42701 662 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 KCNC4Q03721 635 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.498e-9■■■■■ 27.4
SUPT16H-202ENST00000552829 TARDBPQ13148 414 aaKnown RBP eCLIP12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 ORC1Q13415 861 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 STARD3Q14849 445 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 FAM184AQ8NB25 1140 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 SCAMP5Q8TAC9 235 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 TSC1Q92574 1164 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 RAD54LQ92698 747 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 AK8Q96MA6 479 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 MRPL45Q9BRJ2 306 aaKnown RBP12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 ORAI3Q9BRQ5 295 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 SEMA4CQ9C0C4 833 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 ZHX3Q9H4I2 956 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 C6orf106Q9H6K1 298 aaPredicted RBP12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 FTSJ1Q9UET6 329 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 PTPRJQ12913 1337 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 AHCTF1Q8WYP5 2266 aa12.02□□□□□ -0.49
SUPT16H-202ENST00000552829 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 B8ZZF3 427 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 ENC1O14682 589 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 STX6O43752 255 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 TBCAO75347 108 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 IRF1P10914 325 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 SYT1P21579 422 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 TEAD4Q15561 434 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 FBXL19Q6PCT2 694 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 TPGS1Q6ZTW0 290 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 SFR1Q86XK3 245 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 FMNL3Q8IVF7 1028 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 SPACA3Q8IXA5 215 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 PRCCQ92733 491 aaPredicted RBP12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 TMEM176AQ96HP8 235 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 ZMYND15Q9H091 742 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 COMMD8Q9NX08 183 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 AK5Q9Y6K8 562 aa12.01□□□□□ -0.49
SUPT16H-202ENST00000552829 USP9XQ93008 2570 aaPredicted RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 PLXNA2O75051 1894 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 A0A1B0GTQ1 180 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 GOLGA8IPA6NC78 632 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 GOLGA8JA6NMD2 632 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 DFNA5O60443 496 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 BRINP1O60477 761 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 TSPAN3O60637 253 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 PENKP01210 267 aaPredicted RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 KRT18P05783 430 aaKnown RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 TMEM191BP0C7N4 346 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 ACSL1P33121 698 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 ACADVLP49748 655 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 MFAP3P55082 362 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 RHDQ02161 417 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 IFRD2Q12894 506 aaPredicted RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 DSG2Q14126 1118 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 INAVAQ3KP66 663 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 FOXD4L6Q3SYB3 417 aaPredicted RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 L1TD1Q5T7N2 865 aaKnown RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 FOXD4L3Q6VB84 417 aaPredicted RBP12□□□□□ -0.49
SUPT16H-202ENST00000552829 Q6ZNB5 142 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 PAQR9Q6ZVX9 377 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 USP49Q70CQ1 688 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 ANKRD36BP1Q96IX9 119 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 ACCSQ96QU6 501 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 KCNK16Q96T55 309 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 CBWD1Q9BRT8 395 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 SNX25Q9H3E2 840 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
SUPT16H-202ENST00000552829 CBX4O00257 560 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 TLR5O60602 858 aa11.99□□□□□ -0.49
SUPT16H-202ENST00000552829 RFPL3O75679 317 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms