RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-223ENST00000551260 CTSKP43235 329 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 RARRES1P49788 294 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 TPMTP51580 245 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 EPHA7Q15375 998 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 HIF1AQ16665 826 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 LY6G5CQ5SRR4 150 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 FAM124AQ86V42 546 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 CHPFQ8IZ52 775 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 CADM4Q8NFZ8 388 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 RFFLQ8WZ73 363 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 SCARF2Q96GP6 870 aaPredicted RBP6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 MYO19Q96H55 970 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 MTMR9Q96QG7 549 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 MTA3Q9BTC8 594 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 ZCWPW1Q9H0M4 648 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 C6orf106Q9H6K1 298 aaPredicted RBP6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 ZSWIM4Q9H7M6 989 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 TOPORSQ9NS56 1045 aaPredicted RBP6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 TMLHEQ9NVH6 421 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 VPS54Q9P1Q0 977 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 USP36Q9P275 1121 aaKnown RBP6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 HSFX1Q9UBD0 423 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 DDX25Q9UHL0 483 aaKnown RBP6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 PLAAQ9Y263 795 aa6.35□□□□□ -1.39
RACGAP1-223ENST00000551260 RP1L1Q8IWN7 2480 aaPredicted RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 A0A1W2PNU3 283 aaPredicted RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 RNF225M0QZC1 329 aaPredicted RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 PAPSS1O43252 624 aaPredicted RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ZBTB43O43298 467 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 TULP3O75386 442 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 CSH1P0DML2 217 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 CSH2P0DML3 217 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 CDK4P11802 303 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 HARSP12081 509 aaKnown RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 TCF3P15923 654 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 HDCP19113 662 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 GNA11P29992 359 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 DCTP40126 519 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 AFMP43652 599 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 AARSP49588 968 aaKnown RBP eCLIP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ERVPABLB-1P60509 514 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 RPL10AP62906 217 aaKnown RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ST3GAL1Q11201 340 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 BNIP3Q12983 259 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 KCNB1Q14721 858 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 SAFBQ15424 915 aaKnown RBP eCLIP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 DDR2Q16832 855 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 SLC10A6Q3KNW5 377 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ZNF568Q3ZCX4 644 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 FUT11Q495W5 492 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 SYNE3Q6ZMZ3 975 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 CAPN12Q6ZSI9 719 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 TRMT11Q7Z4G4 463 aaKnown RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 SYT9Q86SS6 491 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ETFBKMTQ8IXQ9 262 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 HAS1Q92839 578 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 BTBD6Q96KE9 485 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 FAM20AQ96MK3 541 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 MMS19Q96T76 1030 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 GABRG3Q99928 467 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 TRIM9Q9C026 710 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 MKRN2Q9H000 416 aaKnown RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 RNF38Q9H0F5 515 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 C2orf40Q9H1Z8 148 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ITM2CQ9NQX7 267 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ARHGAP26Q9UNA1 814 aa6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 RBM8AQ9Y5S9 174 aaKnown RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 ZNF106Q9H2Y7 1883 aaKnown RBP6.34□□□□□ -1.39
RACGAP1-223ENST00000551260 SHANK1Q9Y566 2161 aa6.34□□□□□ -1.4
RACGAP1-223ENST00000551260 NIPBLQ6KC79 2804 aaeCLIP6.34□□□□□ -1.4
RACGAP1-223ENST00000551260 TNRC6AQ8NDV7 1962 aaKnown RBP6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 PRRC2CQ9Y520 2896 aaKnown RBP6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 PRRT4C9JH25 899 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 LAD1O00515 517 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 PPFIA2O75334 1257 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 PRPF40AO75400 957 aaKnown RBP6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 NOL4O94818 638 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 ITGAVP06756 1048 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 TYMPP19971 482 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 ABCB4P21439 1286 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 GRIK1P39086 918 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 GRIA4P48058 902 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 LSSP48449 732 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 CLCA4Q14CN2 919 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 NCAPHQ15003 741 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 TBR1Q16650 682 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 CCDC142Q17RM4 750 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 C3orf38Q5JPI3 329 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 USP53Q70EK8 1073 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 TICAM1Q8IUC6 712 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 CACTIN-AS1Q8N1I8 211 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 BEND7Q8N7W2 519 aaPredicted RBP6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 TERB1Q8NA31 727 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 DEPTORQ8TB45 409 aa6.33□□□□□ -1.4
RACGAP1-223ENST00000551260 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms