RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SPATA24Q86W54 205 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 WDR49Q8IV35 697 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 NME8Q8N427 588 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 RAB3IL1Q8TBN0 382 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 WNK4Q96J92 1243 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 PAK5Q9P286 719 aa14.21□□□□□ -0.14
HDAC7-228ENST00000548938 TXNDC9O14530 226 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 CREB3O43889 395 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 STK10O94804 968 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 PABPC1LQ4VXU2 614 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 FASTKD1Q53R41 847 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 FBXL19Q6PCT2 694 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 ABHD15Q6UXT9 468 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 BIRC5O15392 142 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 SIN3BO75182 1162 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 GSRP00390 522 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 PIM1P11309 404 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 VAV1P15498 845 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 RBL1P28749 1068 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 L1CAMP32004 1257 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 PDK3Q15120 406 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 ZNF699Q32M78 642 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 MMEL1Q495T6 779 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 TCHHL1Q5QJ38 904 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 ARCQ7LC44 396 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 MAVSQ7Z434 540 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 RSPH3Q86UC2 560 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 WDR75Q8IWA0 830 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 MPP5Q8N3R9 675 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 PIWIL2Q8TC59 973 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 NMD3Q96D46 503 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 SDCBP2Q9H190 292 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 ETNK2Q9NVF9 386 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 CLIC5Q9NZA1 410 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 GPRC5DQ9NZD1 345 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 NXF1Q9UBU9 619 aaKnown RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 CDH22Q9UJ99 828 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 CTDP1Q9Y5B0 961 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-228ENST00000548938 MAD1L1Q9Y6D9 718 aa14.2□□□□□ -0.14
HDAC7-228ENST00000548938 SF3B1O75533 1304 aaKnown RBP eCLIP14.19□□□□□ -0.142e-6■■■■■ 45.3
HDAC7-228ENST00000548938 TRDMT1O14717 391 aaKnown RBP14.19□□□□□ -0.14
HDAC7-228ENST00000548938 FAM189A1O60320 539 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 PGM3O95394 542 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 RAG1P15918 1043 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 SERPINB6P35237 376 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 TFAMQ00059 246 aaKnown RBP14.19□□□□□ -0.14
HDAC7-228ENST00000548938 TRPC3Q13507 836 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 TEDDM1Q5T9Z0 273 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 MBLAC2Q68D91 279 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 PGM2L1Q6PCE3 622 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 ISLR2Q6UXK2 745 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 CYP4V2Q6ZWL3 525 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-228ENST00000548938 RNF146Q9NTX7 359 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 FZD1Q9UP38 647 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 HEY1Q9Y5J3 304 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 KCNA4P22459 653 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 ARL2P36404 184 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 ATG14Q6ZNE5 492 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 HPS6Q86YV9 775 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-228ENST00000548938 LPAR1Q92633 364 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 TCHPQ9BT92 498 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 DHX33Q9H6R0 707 aaKnown RBP14.19□□□□□ -0.14
HDAC7-228ENST00000548938 SLC17A6Q9P2U8 582 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 ATXN10Q9UBB4 475 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 APOBEC2Q9Y235 224 aaKnown RBP14.19□□□□□ -0.14
HDAC7-228ENST00000548938 POMPQ9Y244 141 aa14.19□□□□□ -0.14
HDAC7-228ENST00000548938 SIP14410 1827 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 FGF3P11487 239 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-228ENST00000548938 CAPSQ13938 189 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 GRAMD1BQ3KR37 738 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ANKRD20A4Q4UJ75 823 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 UGT2A3Q6UWM9 527 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 TMEM130Q8N3G9 435 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 APBB2Q92870 758 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 KLC2Q9H0B6 622 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 XYLT2Q9H1B5 865 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 EMCNQ9ULC0 261 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 C15orf38-AP3S2A0A0A6YYH1 394 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 FAM159BA6NKW6 160 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 PDLIM1O00151 329 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ZMPSTE24O75844 475 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ENDOD1O94919 500 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ZBED1O96006 694 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 SUPT20HL2P0C7V6 817 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 SMIM18P0DKX4 95 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 SLC1A6P48664 564 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 CHN2P52757 468 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 CDH8P55286 799 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 BTKQ06187 659 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 C15orf59Q2T9L4 293 aaPredicted RBP14.18□□□□□ -0.14
HDAC7-228ENST00000548938 SUPT20HL1Q3ZLR7 823 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 VWA5B1Q5TIE3 1220 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ZNF534Q76KX8 674 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 ARPINQ7Z6K5 226 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 UNC5BQ8IZJ1 945 aa14.18□□□□□ -0.14
HDAC7-228ENST00000548938 DEFB107AQ8IZN7 70 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms