RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 UBE2J1Q9Y385 318 aaPredicted RBP7.58□□□□□ -1.2
TRAV11-201ENST00000539512 PPP6R2O75170 966 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 GCATO75600 419 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 CER1O95813 267 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 HNRNPCP07910 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
TRAV11-201ENST00000539512 TMIGD3P0DMS9 266 aaPredicted RBP7.57□□□□□ -1.2
TRAV11-201ENST00000539512 FPR3P25089 353 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 MCM5P33992 734 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 DPTQ07507 201 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 KLF10Q13118 480 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 KCNJ12Q14500 433 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 GRHL2Q6ISB3 625 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 LDHAL6AQ6ZMR3 332 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 Q6ZPA2 131 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 TRABD2AQ86V40 505 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 LDLRAD3Q86YD5 345 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 TERB1Q8NA31 727 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 CTHRC1Q96CG8 243 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 REXO5Q96IC2 774 aaKnown RBP7.57□□□□□ -1.2
TRAV11-201ENST00000539512 TRAPPC9Q96Q05 1148 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 PABPC3Q9H361 631 aaKnown RBP7.57□□□□□ -1.2
TRAV11-201ENST00000539512 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
TRAV11-201ENST00000539512 CCDC134Q9H6E4 229 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 FSCN3Q9NQT6 498 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 SH3BP4Q9P0V3 963 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 INSL6Q9Y581 213 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 DGKBQ9Y6T7 804 aa7.57□□□□□ -1.2
TRAV11-201ENST00000539512 SUV39H1O43463 412 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 CBFA2T3O75081 653 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 LARGE1O95461 756 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 KRT4P19013 534 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 ACVRL1P37023 503 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 RENBPP51606 427 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 TGFB2P61812 414 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 PSG6Q00889 435 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 RNASELQ05823 741 aaKnown RBP7.56□□□□□ -1.2
TRAV11-201ENST00000539512 DEUP1Q05D60 604 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 LMAN2Q12907 356 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 PPFIA1Q13136 1202 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 FHL3Q13643 280 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 ANKRD40Q6AI12 368 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 TANGO2Q6ICL3 276 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 LIN54Q6MZP7 749 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 PIK3AP1Q6ZUJ8 805 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 C12orf76Q8N812 135 aaPredicted RBP7.56□□□□□ -1.2
TRAV11-201ENST00000539512 STT3BQ8TCJ2 826 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 OTUD7AQ8TE49 926 aaPredicted RBP7.56□□□□□ -1.2
TRAV11-201ENST00000539512 SLC22A17Q8WUG5 538 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 TBC1D20Q96BZ9 403 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 ZSCAN31Q96LW9 406 aaPredicted RBP7.56□□□□□ -1.2
TRAV11-201ENST00000539512 PRDM8Q9NQV8 689 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 IL17RBQ9NRM6 502 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 LUZP4Q9P127 313 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 KIF17Q9P2E2 1029 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 ASAP1Q9ULH1 1129 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 VPS4AQ9UN37 437 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 C19orf53Q9UNZ5 99 aaPredicted RBP7.56□□□□□ -1.2
TRAV11-201ENST00000539512 PCDHB2Q9Y5E7 798 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 WNT6Q9Y6F9 365 aa7.56□□□□□ -1.2
TRAV11-201ENST00000539512 WDR33Q9C0J8 1336 aaKnown RBP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 KIF28PB7ZC32 967 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 IPO5O00410 1097 aaKnown RBP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 CTIFO43310 598 aaKnown RBP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 RPP40O75818 363 aaKnown RBP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 JTBO76095 146 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 ELFN1P0C7U0 828 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 HSD3B1P14060 373 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 MATN1P21941 496 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 THBS4P35443 961 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 IGHMBP2P38935 993 aaKnown RBP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 ARL4CP56559 192 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 CYP4F2P78329 520 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 C4orf46Q504U0 113 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 FAM90A2PQ658T7 463 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 JMJD6Q6NYC1 403 aaPredicted RBP7.55□□□□□ -1.2
TRAV11-201ENST00000539512 MSANTD2Q6P1R3 559 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 TMEM65Q6PI78 240 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 OLFML1Q6UWY5 402 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 TRIM72Q6ZMU5 477 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 MLXIPQ9HAP2 919 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 ASB6Q9NWX5 421 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 NDUFAF4Q9P032 175 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 PCDHGB3Q9Y5G1 929 aa7.55□□□□□ -1.2
TRAV11-201ENST00000539512 TTC34A8MYJ7 566 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 ALADP13716 330 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 AARSP49588 968 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAV11-201ENST00000539512 JAK3P52333 1124 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 HOXA4Q00056 320 aaPredicted RBP7.54□□□□□ -1.2
TRAV11-201ENST00000539512 DNASE1L3Q13609 305 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 TAF5Q15542 800 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 AMIGO2Q86SJ2 522 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 GOLGA1Q92805 767 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 CCDC17Q96LX7 622 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 FYTTD1Q96QD9 318 aaKnown RBP7.54□□□□□ -1.2
TRAV11-201ENST00000539512 ADGRE3Q9BY15 652 aa7.54□□□□□ -1.2
TRAV11-201ENST00000539512 SAP30LQ9HAJ7 183 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms