RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 HFE2Q6ZVN8 426 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 ARMC2Q8NEN0 867 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 BCL7CQ8WUZ0 217 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 PAIP2Q9BPZ3 127 aaKnown RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 NRDE2Q9H7Z3 1164 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 POPDC2Q9HBU9 364 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.32□□□□□ -1.08
COL21A1-212ENST00000535941 RAD54BQ9Y620 910 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 RPS6KL1Q9Y6S9 549 aa8.32□□□□□ -1.08
COL21A1-212ENST00000535941 GOLGA8KD6RF30 607 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 BRCC3P46736 316 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 TNK2Q07912 1038 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ACTN3Q08043 901 aaPredicted RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 AGBL2Q5U5Z8 902 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 OR6B2Q6IFH4 312 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 LRRC45Q96CN5 670 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SPATA17Q96L03 361 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SH3GL3Q99963 347 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 DHRS4Q9BTZ2 278 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 KLHL11Q9NVR0 708 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 FETUBQ9UGM5 382 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ANKRD36A6QL64 1941 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ARHGEF37A1IGU5 675 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SRRM3A6NNA2 597 aaPredicted RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SMAPO00193 183 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 RIPK2O43353 540 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 POMCP01189 267 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 IGLV3-27P01718 113 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GCAP28676 217 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ADORA2BP29275 332 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 CHKAP35790 457 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 NDUFV1P49821 464 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ZNF135P52742 658 aaPredicted RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 HTRA3P83110 453 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SLC10A2Q12908 348 aaPredicted RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 MORF4L2Q15014 288 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SNX30Q5VWJ9 437 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 TRMT10CQ7L0Y3 403 aaKnown RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GPR65Q8IYL9 337 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ITFG2Q969R8 447 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 QKIQ96PU8 341 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GORASP1Q9BQQ3 440 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 DNAJB4Q9UDY4 337 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SHOC2Q9UQ13 582 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 NOTCH4Q99466 2003 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 MUC22E2RYF6 1773 aaPredicted RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GOLGA6CA6NDK9 693 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 PI4K2BG5E9Z4 385 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 NDUFAB1O14561 156 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 CACNG3O60359 315 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GOLGA6DP0CG33 693 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 YY1P25490 414 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 SDC4P31431 198 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 NR2C2P49116 596 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 PITX1P78337 314 aaPredicted RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 OTUD4Q01804 1114 aaKnown RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 ADAT2Q7Z6V5 191 aaKnown RBP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 BBOF1Q8ND07 529 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 FATE1Q969F0 183 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 PGM2Q96G03 612 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 PIGVQ9NUD9 493 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GOLGA6AQ9NYA3 693 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 LGALS13Q9UHV8 139 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 TRIM17Q9Y577 477 aa8.31□□□□□ -1.08
COL21A1-212ENST00000535941 GOLGA6BA6NDN3 693 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 YJEFN3A6XGL0 299 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 KCNU1A8MYU2 1149 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 E7ENQ6 273 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 NDC80O14777 642 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 TSHRP16473 764 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 HTR7P34969 479 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 ATXN1P54253 815 aaKnown RBP8.3□□□□□ -1.08
COL21A1-212ENST00000535941 YWHAZP63104 245 aaKnown RBP8.3□□□□□ -1.08
COL21A1-212ENST00000535941 MMRN1Q13201 1228 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 RBBP5Q15291 538 aaKnown RBP8.3□□□□□ -1.08
COL21A1-212ENST00000535941 SMTNL2Q2TAL5 461 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 P3H1Q32P28 736 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 EFHC2Q5JST6 749 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 KCNT1Q5JUK3 1230 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 SYPL2Q5VXT5 272 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 SCD5Q86SK9 330 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 DEFB106AQ8N104 65 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.08
COL21A1-212ENST00000535941 CCDC89Q8N998 374 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 ACTL9Q8TC94 416 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 C2orf15Q8WU43 125 aaKnown RBP8.3□□□□□ -1.08
COL21A1-212ENST00000535941 CSPG4P5Q96PW8 444 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 KCNK16Q96T55 309 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 TTLL2Q9BWV7 592 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 SMOC2Q9H3U7 446 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 PLAC1Q9HBJ0 212 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 ETAA1Q9NY74 926 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 FBXW11Q9UKB1 542 aa8.3□□□□□ -1.08
COL21A1-212ENST00000535941 SCML2Q9UQR0 700 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms