RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CXCR5P32302 372 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 PTPN9P43378 593 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 RNASE9P60153 205 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 TMEM184AQ6ZMB5 413 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 MICALL1Q8N3F8 863 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CASP10Q92851 521 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CD101Q93033 1021 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 BTBD6Q96KE9 485 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 TBCBQ99426 244 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 SMOQ99835 787 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 LPIN3Q9BQK8 851 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CARD6Q9BX69 1037 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 COMMD8Q9NX08 183 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 TMEM59LQ9UK28 342 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 FBXW11Q9UKB1 542 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 TTC7AQ9ULT0 858 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 F8VP50 259 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CCDC188H7C350 402 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 SRGAP2O75044 1071 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 DAB1O75553 588 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 RTN3O95197 1032 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 ZRANB2O95218 330 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 TUBBP07437 444 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 EPCAMP16422 314 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CYP2F1P24903 491 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 NOS2P35228 1153 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 GTF2F1P35269 517 aaKnown RBP eCLIP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 MATKP42679 507 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 ALDH1A3P47895 512 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CDR1P51861 262 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 ADAM15Q13444 863 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 KCNC3Q14003 757 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CCDC142Q17RM4 750 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 MGAT5BQ3V5L5 792 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 XP32Q5T750 250 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CC2D1AQ6P1N0 951 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 BEND5Q7L4P6 421 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 ZNF572Q7Z3I7 529 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 CREG2Q8IUH2 290 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 MAP7D3Q8IWC1 876 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 SCN4BQ8IWT1 228 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 KATNAL2Q8IYT4 538 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 EXD1Q8NHP7 514 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 SLC7A14Q8TBB6 771 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 SEPT5Q99719 369 aaPredicted RBP11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 MAN1C1Q9NR34 630 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 DZANK1Q9NVP4 752 aa11.41□□□□□ -0.58
CCDC90B-218ENST00000533761 ATG2AQ2TAZ0 1938 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 PIK3R2O00459 728 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 CAPN5O15484 640 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 DDX3YO15523 660 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 SEC24AO95486 1093 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 VNN2O95498 520 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 F9P00740 461 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 LRG1P02750 347 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 C8AP07357 584 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 HAPLN1P10915 354 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 HOXB8P17481 243 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 MCM3P25205 808 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 DAOAP59103 153 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 PLD1Q13393 1074 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 SLC25A52Q3SY17 297 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 PPM1LQ5SGD2 360 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 SND1Q7KZF4 910 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 STRADAQ7RTN6 431 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 CCDC50Q8IVM0 306 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 RCOR2Q8IZ40 523 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 NUP93Q8N1F7 819 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 RASGEF1CQ8N431 466 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 EMC1Q8N766 993 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 COG1Q8WTW3 980 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 RXFP2Q8WXD0 754 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 SPATA17Q96L03 361 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 RUNDC3BQ96NL0 473 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 KCNK16Q96T55 309 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 HOMER3Q9NSC5 361 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 TJP2Q9UDY2 1190 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 INSL5Q9Y5Q6 135 aa11.4□□□□□ -0.58
CCDC90B-218ENST00000533761 MTCL1Q9Y4B5 1905 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 LRCH4O75427 683 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 ZMYND10O75800 440 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 BEST1O76090 585 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 LTFP02788 710 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 HOXA9P31269 272 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 PEX5P50542 639 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 SLC5A3P53794 718 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 EPHB3P54753 998 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 AIF1P55008 147 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 VEPH1Q14D04 833 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 LONRF2Q1L5Z9 754 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 DCAF6Q58WW2 860 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 PM20D1Q6GTS8 502 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 EP400NLQ6ZTU2 488 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 DENND5BQ6ZUT9 1274 aa11.39□□□□□ -0.59
CCDC90B-218ENST00000533761 TADA2BQ86TJ2 420 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms