RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 LINC00523Q86TU6 105 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 ARHGAP24Q8N264 748 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 NAT16Q8N8M0 369 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 C11orf84Q9BUA3 381 aaPredicted RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 CNKSR3Q6P9H4 555 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 FAM47EQ6ZV65 393 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 RD3Q7Z3Z2 195 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 B3GNT5Q9BYG0 378 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 AAR2Q9Y312 384 aaKnown RBP16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 COL18A1P39060 1754 aa16.23■□□□□ 0.19
PPFIA1-222ENST00000532504 ATP5BP06576 529 aaKnown RBP16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 MAGOHP61326 146 aaKnown RBP16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 GPM6BQ13491 265 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 TBCBQ99426 244 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 PLK2Q9NYY3 685 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 CTIFO43310 598 aaKnown RBP16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 DDHD2O94830 711 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 PBLDP30039 288 aaPredicted RBP16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 KYNUQ16719 465 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 PPIL6Q8IXY8 311 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 RWDD3Q9Y3V2 267 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 INSL6Q9Y581 213 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 BRAFP15056 766 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 RBBP7Q16576 425 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 TRIM48Q8IWZ4 208 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 REXO1L1PQ8IX06 675 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 NDRG1Q92597 394 aaKnown RBP16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 M0R2N6 131 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 MDM4O15151 490 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 TBL1XO60907 577 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 FDFT1P37268 417 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 MAP7Q14244 749 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 LBRQ14739 615 aaKnown RBP16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 KIF19Q2TAC6 998 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 ZNF284Q2VY69 593 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 MFSD7Q6UXD7 560 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 STAMBPL1Q96FJ0 436 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 BBS2Q9BXC9 721 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 RPS6KL1Q9Y6S9 549 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 ITGB4P16144 1822 aa16.22■□□□□ 0.19
PPFIA1-222ENST00000532504 CSF2RAP15509 400 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 SPARCL1Q14515 664 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 DAW1Q8N136 415 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 MCRS1Q96EZ8 462 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 TSPAN18Q96SJ8 248 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 BRD9Q9H8M2 597 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 TBC1D13Q9NVG8 400 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 FAM50BQ9Y247 325 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 SMIM24O75264 130 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 SOAT2O75908 522 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 TGM2P21980 687 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 VSNL1P62760 191 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 FOXD4Q12950 439 aaPredicted RBP16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 UGP2Q16851 508 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 PIH1D1Q9NWS0 290 aaKnown RBP16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 SUN1O94901 812 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 SERPINF2P08697 491 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 CDC25CP30307 473 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 RABGGTBP53611 331 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 GEMIN4P57678 1058 aaKnown RBP16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 GRIN3AQ8TCU5 1115 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 ERP44Q9BS26 406 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 GANQ9H2C0 597 aa16.21■□□□□ 0.19
PPFIA1-222ENST00000532504 ABHD14A-ACY1A0A1B0GW23 586 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 LRRC10BA6NIK2 292 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 RHOBTB1O94844 696 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 CHKAP35790 457 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 PSEN1P49768 467 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 SPIRE1Q08AE8 756 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 RARS2Q5T160 578 aaKnown RBP16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 TMC5Q6UXY8 1006 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 CALML6Q8TD86 181 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 YIPF2Q9BWQ6 316 aa16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.21■□□□□ 0.18
PPFIA1-222ENST00000532504 NRP1O14786 923 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 CNMDO75829 334 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 C4BPAP04003 597 aaKnown RBP16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 CRLF3Q8IUI8 442 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 DPEP3Q9H4B8 488 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 L1RE1Q9UN81 338 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 NAALADL1Q9UQQ1 740 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 A0A1W2PQH9 124 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 PRPF4O43172 522 aaKnown RBP eCLIP16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 MAGEA4P43358 317 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 CARSP49589 748 aaKnown RBP16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 NT5DC3Q86UY8 548 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 COLGALT1Q8NBJ5 622 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 OSGEPL1Q9H4B0 414 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 CDHR5Q9HBB8 845 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 A0A0A6YYK5 440 aaPredicted RBP16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 MSI1O43347 362 aaKnown RBP16.2■□□□□ 0.18
PPFIA1-222ENST00000532504 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms