RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
CAPN1-213ENST00000527897 APEX2Q9UBZ4 518 aa16.26■□□□□ 0.19
CAPN1-213ENST00000527897 MMP17Q9ULZ9 603 aa16.26■□□□□ 0.19
CAPN1-213ENST00000527897 EML5Q05BV3 1969 aa16.26■□□□□ 0.19
CAPN1-213ENST00000527897 MYO18AQ92614 2054 aaKnown RBP16.25■□□□□ 0.19
CAPN1-213ENST00000527897 SDK1Q7Z5N4 2213 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 MED7O43513 233 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 PON1P27169 355 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 ERCC5P28715 1186 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-213ENST00000527897 TNFRSF4P43489 277 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 ANO7Q6IWH7 933 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 DENND1BQ6P3S1 775 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 PHTF2Q8N3S3 785 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 ZNF513Q8N8E2 541 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-213ENST00000527897 TERB1Q8NA31 727 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 IL17RCQ8NAC3 791 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 GAB3Q8WWW8 586 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 ERLEC1Q96DZ1 483 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 TUBGCP2Q9BSJ2 902 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 ABCC13Q9NSE7 274 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 AGO1Q9UL18 857 aaKnown RBP16.25■□□□□ 0.19
CAPN1-213ENST00000527897 INVSQ9Y283 1065 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 ZNF510Q9Y2H8 683 aa16.25■□□□□ 0.19
CAPN1-213ENST00000527897 RALGAPA1Q6GYQ0 2036 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 KCNJ18B7U540 433 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 SGK1O00141 431 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 MSI1O43347 362 aaKnown RBP16.24■□□□□ 0.19
CAPN1-213ENST00000527897 CACNG3O60359 315 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 GABBR2O75899 941 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 LTFP02788 710 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 CHKAP35790 457 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 WASP42768 502 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 HARS2P49590 506 aaKnown RBP16.24■□□□□ 0.19
CAPN1-213ENST00000527897 DGKGP49619 791 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 SPEM2Q0P670 501 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 KCNJ12Q14500 433 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 VWA3BQ502W6 1294 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 TOGARAM2Q6ZUX3 1019 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-213ENST00000527897 ZNF606Q8WXB4 792 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 FAM149B1Q96BN6 582 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 PLD4Q96BZ4 506 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 HSFY1Q96LI6 401 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 FAM81BQ96LP2 452 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 NDST4Q9H3R1 872 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 SAMSN1Q9NSI8 373 aaKnown RBP16.24■□□□□ 0.19
CAPN1-213ENST00000527897 CNTN6Q9UQ52 1028 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 SPTBN4Q9H254 2564 aa16.24■□□□□ 0.19
CAPN1-213ENST00000527897 CCDC163A0A0D9SF12 145 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 TSPAN3O60637 253 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 CYBBP04839 570 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 KIR2DL1P43626 348 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-213ENST00000527897 CRY1Q16526 586 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 EOGTQ5NDL2 527 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 TMEM92Q6UXU6 159 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 KBTBD6Q86V97 674 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 SCUBE3Q8IX30 993 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 PGBD3Q8N328 593 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 DDI1Q8WTU0 396 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 IRGQQ8WZA9 623 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 MARK1Q9P0L2 795 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 BCCIPQ9P287 314 aaKnown RBP eCLIP16.23■□□□□ 0.19
CAPN1-213ENST00000527897 AJAP1Q9UKB5 411 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-213ENST00000527897 NFE2L3Q9Y4A8 694 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 SPAG17Q6Q759 2223 aa16.23■□□□□ 0.19
CAPN1-213ENST00000527897 A0A0A0MRY4 1105 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 GTPBP10A4D1E9 387 aaKnown RBP16.22■□□□□ 0.19
CAPN1-213ENST00000527897 BECN2A8MW95 431 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 DCLK1O15075 740 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 ALDH1A2O94788 518 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 FBXO21O94952 628 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 RETP07949 1114 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-213ENST00000527897 NCAM1P13591 858 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 HNRNPLP14866 589 aaKnown RBP eCLIP16.22■□□□□ 0.19
CAPN1-213ENST00000527897 GBP1P32455 592 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 GPD2P43304 727 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 RAPGEF1Q13905 1077 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 EGFLAMQ63HQ2 1017 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 SASS6Q6UVJ0 657 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 CACNA2D4Q7Z3S7 1137 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
CAPN1-213ENST00000527897 PASD1Q8IV76 773 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 MDGA1Q8NFP4 955 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 HMGB4Q8WW32 186 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 POLMQ9NP87 494 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-213ENST00000527897 PARD6AQ9NPB6 346 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 DNAJC12Q9UKB3 198 aa16.22■□□□□ 0.19
CAPN1-213ENST00000527897 HBS1LQ9Y450 684 aaKnown RBP16.22■□□□□ 0.19
CAPN1-213ENST00000527897 TCRBV21S2A2A0A5A6 115 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 PRRT4C9JH25 899 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 E5RJQ4 531 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 ACADSBP45954 432 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 ID4P47928 161 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 TRIP4Q15650 581 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-213ENST00000527897 CCDC6Q16204 474 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 HSF5Q4G112 596 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-213ENST00000527897 USP39Q53GS9 565 aaKnown RBP16.21■□□□□ 0.19
CAPN1-213ENST00000527897 MIIPQ5JXC2 388 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms