RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 STC2O76061 302 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 CAVIN2O95810 425 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 YWHAGP61981 247 aaKnown RBP eCLIP12.54□□□□□ -0.4
MED28-203ENST00000503945 CREB5Q02930 508 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 PDE4CQ08493 712 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 MESP2Q0VG99 397 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 MORC3Q14149 939 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 FOXR2Q6PJQ5 311 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 TMEM270Q6UE05 265 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 CREBRFQ8IUR6 639 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 SFTPA1Q8IWL2 248 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 PHTF2Q8N3S3 785 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 SRRTQ9BXP5 876 aaKnown RBP12.54□□□□□ -0.4
MED28-203ENST00000503945 TPSD1Q9BZJ3 242 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 MARK1Q9P0L2 795 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 MARCH2Q9P0N8 246 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 TSPAN16Q9UKR8 245 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 HELZP42694 1942 aaKnown RBP12.54□□□□□ -0.4
MED28-203ENST00000503945 SLC12A8A0AV02 714 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 C4orf47A7E2U8 309 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 GIPC1O14908 333 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 CACNG3O60359 315 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 ADAM23O75077 832 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 KLKB1P03952 638 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 CYBBP04839 570 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 HMBSP08397 361 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 PAEPP09466 180 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 NTSR1P30989 418 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 HARS2P49590 506 aaKnown RBP12.53□□□□□ -0.4
MED28-203ENST00000503945 DGKGP49619 791 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 BCAT1P54687 386 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
MED28-203ENST00000503945 CNGA2Q16280 664 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 PSAPL1Q6NUJ1 521 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 Q6ZNB5 142 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 DENND1CQ8IV53 801 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 CHPFQ8IZ52 775 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 SIX6OS1Q8N1H7 587 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 PPM1KQ8N3J5 372 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 TERB1Q8NA31 727 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 MDGA1Q8NFP4 955 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 RNF139Q8WU17 664 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 HMGB4Q8WW32 186 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 OLA1Q9NTK5 396 aaKnown RBP12.53□□□□□ -0.4
MED28-203ENST00000503945 RALYQ9UKM9 306 aaKnown RBP12.53□□□□□ -0.4
MED28-203ENST00000503945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
MED28-203ENST00000503945 CFAP47Q6ZTR5 3102 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 ZFHX4Q86UP3 3567 aa12.53□□□□□ -0.4
MED28-203ENST00000503945 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
MED28-203ENST00000503945 CHD6Q8TD26 2715 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 TRIM24O15164 1050 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 CISD3P0C7P0 127 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 LCP1P13796 627 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 BMP6P22004 513 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 STX17P56962 302 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 KCNH2Q12809 1159 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 PAK1Q13153 545 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 E2F5Q15329 346 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 STILQ15468 1287 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 BSPRYQ5W0U4 402 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 LCLAT1Q6UWP7 414 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 RRAGAQ7L523 313 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 LPCAT2Q7L5N7 544 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 NDRG1Q92597 394 aaKnown RBP12.52□□□□□ -0.41
MED28-203ENST00000503945 BHMTQ93088 406 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 SPACA7Q96KW9 195 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 EDEM2Q9BV94 578 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 ABCC13Q9NSE7 274 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 PLK2Q9NYY3 685 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 AGO1Q9UL18 857 aaKnown RBP12.52□□□□□ -0.41
MED28-203ENST00000503945 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 PI4KAP42356 2102 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 GON4LQ3T8J9 2241 aa12.52□□□□□ -0.41
MED28-203ENST00000503945 TCRBV21S2A2A0A5A6 115 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
MED28-203ENST00000503945 TULP2O00295 520 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 KHNYNO15037 678 aaKnown RBP12.51□□□□□ -0.41
MED28-203ENST00000503945 TIMM44O43615 452 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 PROS1P07225 676 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 HNRNPLP14866 589 aaKnown RBP eCLIP12.51□□□□□ -0.41
MED28-203ENST00000503945 BCKDHBP21953 392 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 CORO1AP31146 461 aaKnown RBP12.51□□□□□ -0.41
MED28-203ENST00000503945 WASP42768 502 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 DHPSP49366 369 aaPredicted RBP12.51□□□□□ -0.41
MED28-203ENST00000503945 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
MED28-203ENST00000503945 UBE2HP62256 183 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 ADIGQ0VDE8 80 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 CAMK4Q16566 473 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 SPDYCQ5MJ68 293 aa12.51□□□□□ -0.41
MED28-203ENST00000503945 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms