RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 GSDMBQ8TAX9 411 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 MGARPQ8TDB4 240 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TRAPPC12Q8WVT3 735 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 RTP4Q96DX8 246 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 TMEM121Q9BTD3 319 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 BATF3Q9NR55 127 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 PDGFCQ9NRA1 345 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 SORCS3Q9UPU3 1222 aa7.67□□□□□ -1.18
PDGFC-203ENST00000502773 PTPRJQ12913 1337 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 E5RJQ4 531 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 RECQL4O94761 1208 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PDHA1P08559 390 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 RARBP10826 455 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SMPD1P17405 629 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 POLD2P49005 469 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PAPOLAP51003 745 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PDK4Q16654 411 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 AMHR2Q16671 573 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 KIZQ2M2Z5 673 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PARP6Q2NL67 630 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 FAM183BPQ6ZVS7 135 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 LRRC34Q8IZ02 419 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 FAM71DQ8N9W8 422 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CXorf38Q8TB03 319 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CATSPERBQ9H7T0 1116 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 POPDC2Q9HBU9 364 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 DCDC2Q9UHG0 476 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 GRID1Q9ULK0 1009 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 LOC285556D6RIA3 1793 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 TCRBV7S2A1N4TA0A589 114 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CYB561D2O14569 222 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 TGDSO95455 350 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SHBGP04278 402 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF286BP0CG31 522 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 GJA8P48165 433 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 NPY2RP49146 381 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 IRX4P78413 519 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 ZBTB17Q13105 803 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SNX17Q15036 470 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 FSCN1Q16658 493 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CDO1Q16878 200 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 ANO4Q32M45 955 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PPP6R3Q5H9R7 873 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 STXBP5Q5T5C0 1151 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 BEND5Q7L4P6 421 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 FBXO36Q8NEA4 188 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SLC35F5Q8WV83 523 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 C17orf50Q8WW18 174 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 UPF1Q92900 1129 aaKnown RBP eCLIP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 NTAN1Q96AB6 310 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 RMDN2Q96LZ7 410 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 MMADHCQ9H3L0 296 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 STN1Q9H668 368 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 TBK1Q9UHD2 729 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 HEY1Q9Y5J3 304 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 DICER1Q9UPY3 1922 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 ENDOD1O94919 500 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SNAI1O95863 264 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 POLBP06746 335 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 NPR3P17342 541 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CYP2F1P24903 491 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 DNAJB1P25685 340 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 HK2P52789 917 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CDH8P55286 799 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 IFI35P80217 286 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 MRPS6P82932 125 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SMARCB1Q12824 385 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PTK7Q13308 1070 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 DYNC1I2Q13409 638 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 C6orf89Q6UWU4 347 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 CRLF3Q8IUI8 442 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 BBS5Q8N3I7 341 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 DEPDC1BQ8WUY9 529 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 SMARCD1Q96GM5 515 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 NRDE2Q9H7Z3 1164 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 ADAM28Q9UKQ2 775 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 R3HDM2Q9Y2K5 976 aaKnown RBP7.66□□□□□ -1.18
PDGFC-203ENST00000502773 MAD1L1Q9Y6D9 718 aa7.66□□□□□ -1.18
PDGFC-203ENST00000502773 PIRO00625 290 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 BIRC5O15392 142 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 RAP1GAPP47736 663 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 SLC9A4Q6AI14 798 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 NAPEPLDQ6IQ20 393 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 TIGD7Q6NT04 549 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 KYAT3Q6YP21 454 aaKnown RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 PARP9Q8IXQ6 854 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 SCML4Q8N228 414 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 NAT8LQ8N9F0 302 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 WNT8BQ93098 351 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 FAM193BQ96PV7 902 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 PAFAH2Q99487 392 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 APOL6Q9BWW8 343 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 ADAMTS10Q9H324 1103 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 MCM8Q9UJA3 840 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 AAR2Q9Y312 384 aaKnown RBP7.65□□□□□ -1.18
PDGFC-203ENST00000502773 SMIM28A0A1B0GU29 152 aa7.65□□□□□ -1.18
PDGFC-203ENST00000502773 EEF2KO00418 725 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms