RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CHORDC1Q9UHD1 332 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 DNAI1Q9UI46 699 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PALD1Q9ULE6 856 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 CNOT6Q9ULM6 557 aaKnown RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 LRCH1Q9Y2L9 728 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 TSC22D4Q9Y3Q8 395 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 PCDHA9Q9Y5H5 950 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 SESN1Q9Y6P5 492 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 KIF7Q2M1P5 1343 aa3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF335Q9H4Z2 1342 aaPredicted RBP3.25□□□□□ -1.89
SNRNP48-202ENST00000496946 C15orf38-AP3S2A0A0A6YYH1 394 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 OR6C74A6NCV1 312 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 WTIPA6NIX2 430 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 H7C0S8 307 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 AP3D1O14617 1153 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 RAD51BO15315 384 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MAGEB3O15480 346 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MAFO75444 373 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TOMM70O94826 608 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MT-CO1P00395 513 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MPOP05164 745 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ABCB1P08183 1280 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC192P0DO97 292 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PABPC1P11940 636 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MYL4P12829 197 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 H2AFXP16104 143 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GAP43P17677 238 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 BMP7P18075 431 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TBXAS1P24557 533 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ARL4AP40617 200 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 S100A12P80511 92 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8FQ08AF8 430 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8DPQ0D2H9 430 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CDC16Q13042 620 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SPIDRQ14159 915 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SPARCL1Q14515 664 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ODF1Q14990 250 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 NR1D2Q14995 579 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 LLGL1Q15334 1064 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MEA1Q16626 185 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 KLHL38Q2WGJ6 581 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 LRIT3Q3SXY7 679 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 XKR3Q5GH77 459 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 KCNT1Q5JUK3 1230 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SPDYAQ5MJ70 313 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC35F1Q5T1Q4 408 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 DEPDC1Q5TB30 811 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CPZQ66K79 652 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SPECC1LQ69YQ0 1117 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ATL3Q6DD88 541 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 GPR139Q6DWJ6 353 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR73Q6P4I2 378 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 AAGABQ6PD74 315 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ZC3H14Q6PJT7 736 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CLEC2AQ6UVW9 174 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ZYG11AQ6WRX3 759 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF365Q70YC5 407 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 BZW1Q7L1Q6 419 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FGD2Q7Z6J4 655 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 COMTD1Q86VU5 262 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR49Q8IV35 697 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 NUP93Q8N1F7 819 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 DNAAF3Q8N9W5 541 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ST13P5Q8NFI4 369 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 OR6S1Q8NH40 331 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MYCBPAPQ8TBZ2 947 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 IFI44Q8TCB0 444 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SEPT1Q8WYJ6 367 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEM169Q96HH4 297 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEM237Q96Q45 408 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 DDX23Q9BUQ8 820 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ACPTQ9BZG2 426 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SHCBP1LQ9BZQ2 653 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PITHD1Q9GZP4 211 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PUS7LQ9H0K6 701 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ATP13A3Q9H7F0 1226 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SYNDIG1Q9H7V2 258 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PDE11AQ9HCR9 933 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TM9SF3Q9HD45 589 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 VCX3AQ9NNX9 186 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 DMAP1Q9NPF5 467 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 MRPL40Q9NQ50 206 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TBCCD1Q9NVR7 557 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 THAP1Q9NVV9 213 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 RHBDL2Q9NX52 303 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 TRIM10Q9UDY6 481 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM153AQ9UHL3 310 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ADAM21Q9UKJ8 722 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 ACSL6Q9UKU0 697 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM32AQ9Y421 112 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 PCDHA5Q9Y5H7 936 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SMG6Q86US8 1419 aaKnown RBP3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SNAPC4Q5SXM2 1469 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A087WZG4 1122 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A1B0GWJ7 208 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR91A4D1P6 747 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 SH3D21A4FU49 640 aa3.24□□□□□ -1.89
SNRNP48-202ENST00000496946 NFIBO00712 420 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms