RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 POLR3BQ9NW08 1133 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-213ENST00000482192 DNAJC12Q9UKB3 198 aa12.43□□□□□ -0.42
HMGN1-213ENST00000482192 MMP17Q9ULZ9 603 aa12.43□□□□□ -0.42
HMGN1-213ENST00000482192 FANCMQ8IYD8 2048 aa12.43□□□□□ -0.42
HMGN1-213ENST00000482192 PES1O00541 588 aaKnown RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 HRO43593 1189 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 LTFP02788 710 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 HOXC13P31276 330 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 KIR2DL1P43626 348 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 PXNP49023 591 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 RPL34P49207 117 aaKnown RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 DGKEP52429 567 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 PTK2Q05397 1052 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 SRSF5Q13243 272 aaKnown RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 TRIP4Q15650 581 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 STX1AQ16623 288 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 CCDC183Q5T5S1 534 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 LAIR1Q6GTX8 287 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 MSANTD2Q6P1R3 559 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 PRR23BQ6ZRT6 265 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 TRMT11Q7Z4G4 463 aaKnown RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 SFTPA1Q8IWL2 248 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 SCUBE3Q8IX30 993 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 CPXM2Q8N436 756 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 CCDC33Q8N5R6 958 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 ALLCQ8N6M5 410 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 CLEC4CQ8WTT0 213 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 GAB3Q8WWW8 586 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 MIS12Q9H081 205 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 ACP6Q9NPH0 428 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 ANO10Q9NW15 660 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 EBF1Q9UH73 591 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 GMEB2Q9UKD1 530 aa12.42□□□□□ -0.42
HMGN1-213ENST00000482192 AGO1Q9UL18 857 aaKnown RBP12.42□□□□□ -0.42
HMGN1-213ENST00000482192 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 AXIN1O15169 862 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 MSI1O43347 362 aaKnown RBP12.41□□□□□ -0.42
HMGN1-213ENST00000482192 RPP40O75818 363 aaKnown RBP12.41□□□□□ -0.42
HMGN1-213ENST00000482192 KLF8O95600 359 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-213ENST00000482192 LATS1O95835 1130 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 PENKP01210 267 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-213ENST00000482192 CYBBP04839 570 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 TPM2P07951 284 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-213ENST00000482192 TIE1P35590 1138 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 DGKGP49619 791 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 ZNF445P59923 1031 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 CRY1Q16526 586 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 EOGTQ5NDL2 527 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 CDKAL1Q5VV42 579 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 CEP68Q76N32 757 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 FAM217AQ8IXS0 508 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 IL17RCQ8NAC3 791 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 BHMTQ93088 406 aa12.41□□□□□ -0.42
HMGN1-213ENST00000482192 AJAP1Q9UKB5 411 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-213ENST00000482192 ANTXRLA6NF34 631 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 TRIM24O15164 1050 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 NCAM1P13591 858 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 BPIFB4P59827 614 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 MYL5Q02045 173 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 KCNMA1Q12791 1236 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 PDCLQ13371 301 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 RAPGEF1Q13905 1077 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 LPAL2Q16609 132 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 EMC10Q5UCC4 262 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 FYB2Q5VWT5 728 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 NUGGCQ68CJ6 796 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-213ENST00000482192 BEND5Q7L4P6 421 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-213ENST00000482192 TMEM110Q86TL2 294 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 DCLK2Q8N568 766 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 GPR161Q8N6U8 529 aaKnown RBP12.4□□□□□ -0.42
HMGN1-213ENST00000482192 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-213ENST00000482192 TXNDC5Q8NBS9 432 aaKnown RBP12.4□□□□□ -0.42
HMGN1-213ENST00000482192 FAM149B1Q96BN6 582 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 NOX5Q96PH1 765 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 LHX5Q9H2C1 402 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 TAB2Q9NYJ8 693 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 CYTH4Q9UIA0 394 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 STOML2Q9UJZ1 356 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 STARD13Q9Y3M8 1113 aa12.4□□□□□ -0.42
HMGN1-213ENST00000482192 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-213ENST00000482192 E5RJQ4 531 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 SGK1O00141 431 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-213ENST00000482192 CAPN9O14815 690 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 PAPSS1O43252 624 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-213ENST00000482192 ALDH1A2O94788 518 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 IGLV3-27P01718 113 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 FYNP06241 537 aa12.39□□□□□ -0.43
HMGN1-213ENST00000482192 RETP07949 1114 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms