RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PNPLA1Q8N8W4 532 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 SLC22A17Q8WUG5 538 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 OVCA2Q8WZ82 227 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 RILPL2Q969X0 211 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 KAZALD1Q96I82 304 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 MECRQ9BV79 373 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 VPS45Q9NRW7 570 aa6.57□□□□□ -1.36
SF3B1-210ENST00000482158 ING1Q9UK53 422 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-210ENST00000482158 CCDC189A1A4V9 331 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 KIF28PB7ZC32 967 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 M0QYT0 321 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 QSOX1O00391 747 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 SUV39H1O43463 412 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 PPP6R2O75170 966 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 NPSP0C0P6 89 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 ALADP13716 330 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 GSTM5P46439 218 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 PPM1FP49593 454 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-210ENST00000482158 DGKQP52824 942 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 CYP4F2P78329 520 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 SEMA3BQ13214 749 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 PCID2Q5JVF3 399 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 TTC22Q5TAA0 569 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 TTC30AQ86WT1 665 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 RASAL3Q86YV0 1011 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 CCDC117Q8IWD4 279 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-210ENST00000482158 SFTPA1Q8IWL2 248 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 GPR150Q8NGU9 434 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 WDR60Q8WVS4 1066 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 PPM1EQ8WY54 764 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 EVI5LQ96CN4 794 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 EDC3Q96F86 508 aaKnown RBP6.56□□□□□ -1.36
SF3B1-210ENST00000482158 VPS50Q96JG6 964 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 BBC3Q96PG8 261 aaPredicted RBP6.56□□□□□ -1.36
SF3B1-210ENST00000482158 KCNK9Q9NPC2 374 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 ADAM21Q9UKJ8 722 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 PCDHB7Q9Y5E2 793 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 ENTPD2Q9Y5L3 495 aa6.56□□□□□ -1.36
SF3B1-210ENST00000482158 A0A087X1B8 175 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 CCDC187A0A096LP49 1063 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 GCOM1H8Y6P7 765 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-210ENST00000482158 TMPRSS11DO60235 418 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 PRAMEF2O60811 474 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 HSD3B1P14060 373 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 GPC5P78333 572 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 COL10A1Q03692 680 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 BFSP2Q13515 415 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 P3H1Q32P28 736 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 ATPAF1Q5TC12 328 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-210ENST00000482158 NFRKBQ6P4R8 1299 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 KIRREL2Q6UWL6 708 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 C16orf89Q6UX73 402 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 RRAGAQ7L523 313 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 ZNF354CQ86Y25 554 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 SMAP1Q8IYB5 467 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-210ENST00000482158 LINC01465Q8N7H1 131 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 NPIPB3Q92617 1050 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 GCC1Q96CN9 775 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 FAM167BQ9BTA0 163 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 SCAND2PQ9GZW5 306 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-210ENST00000482158 IL17RBQ9NRM6 502 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 ZBTB1Q9Y2K1 713 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 PCDHB2Q9Y5E7 798 aa6.55□□□□□ -1.36
SF3B1-210ENST00000482158 HMX3A6NHT5 357 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 H0Y3Z8 333 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 CYP21A2P08686 494 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 TMIGD3P0DMS9 266 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-210ENST00000482158 APEHP13798 732 aaKnown RBP6.54□□□□□ -1.36
SF3B1-210ENST00000482158 CXCR5P32302 372 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 ADD2P35612 726 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 CACNA2D1P54289 1103 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 FAM3BP58499 235 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-210ENST00000482158 CUL4BQ13620 913 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 FAM187BQ17R55 369 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 ZNF362Q5T0B9 420 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-210ENST00000482158 RFX8Q6ZV50 586 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 RAB11FIP2Q7L804 512 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 P3H2Q8IVL5 708 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 SPPL3Q8TCT6 385 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 TBC1D5Q92609 795 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 REPS1Q96D71 796 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 TRAPPC9Q96Q05 1148 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 SNX18Q96RF0 628 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 TIMP4Q99727 224 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 SYNPO2LQ9H987 977 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 SAYSD1Q9NPB0 183 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 ASIC5Q9NY37 505 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 LZTS1Q9Y250 596 aa6.54□□□□□ -1.36
SF3B1-210ENST00000482158 ORC4O43929 436 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 ATF7P17544 494 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-210ENST00000482158 CCT5P48643 541 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 CDK7P50613 346 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 BIRC3Q13489 604 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 GALNTL6Q49A17 601 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 TSTD2Q5T7W7 516 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 ACSM6Q6P461 480 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 OLFML1Q6UWY5 402 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 NAPRTQ6XQN6 538 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 DBX2Q6ZNG2 339 aa6.53□□□□□ -1.36
SF3B1-210ENST00000482158 BCDIN3DQ7Z5W3 292 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms