RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 NDRG1Q92597 394 aaKnown RBP16.31■□□□□ 0.2
MRPL55-226ENST00000473066 BHMTQ93088 406 aa16.31■□□□□ 0.2
MRPL55-226ENST00000473066 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
MRPL55-226ENST00000473066 TRIM62Q9BVG3 475 aa16.31■□□□□ 0.2
MRPL55-226ENST00000473066 MIS12Q9H081 205 aa16.31■□□□□ 0.2
MRPL55-226ENST00000473066 NDST4Q9H3R1 872 aa16.31■□□□□ 0.2
MRPL55-226ENST00000473066 GVINP1Q7Z2Y8 2422 aa16.31■□□□□ 0.2
MRPL55-226ENST00000473066 THADAQ6YHU6 1953 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 GREM1O60565 184 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 RPP40O75818 363 aaKnown RBP16.3■□□□□ 0.2
MRPL55-226ENST00000473066 ALDH1A2O94788 518 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 LTFP02788 710 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
MRPL55-226ENST00000473066 PON1P27169 355 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 DGKGP49619 791 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 DGKEP52429 567 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 SRSF5Q13243 272 aaKnown RBP16.3■□□□□ 0.2
MRPL55-226ENST00000473066 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 DENND1CQ8IV53 801 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 KIAA2013Q8IYS2 634 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 ALLCQ8N6M5 410 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 ZNF513Q8N8E2 541 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-226ENST00000473066 GPT2Q8TD30 523 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 GAB3Q8WWW8 586 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 FAM149B1Q96BN6 582 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 POLMQ9NP87 494 aaPredicted RBP16.3■□□□□ 0.2
MRPL55-226ENST00000473066 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 NFE2L3Q9Y4A8 694 aa16.3■□□□□ 0.2
MRPL55-226ENST00000473066 HRO43593 1189 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 PTK2Q05397 1052 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 STX1AQ16623 288 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 SMYD5Q6GMV2 418 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 DENND1BQ6P3S1 775 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 PHTF2Q8N3S3 785 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 DCLK2Q8N568 766 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 TXNDC5Q8NBS9 432 aaKnown RBP16.29■□□□□ 0.2
MRPL55-226ENST00000473066 ANKRD20A12PQ8NF67 263 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 ZNF606Q8WXB4 792 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 SHC3Q92529 594 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 POLR3BQ9NW08 1133 aaPredicted RBP16.29■□□□□ 0.2
MRPL55-226ENST00000473066 PLK2Q9NYY3 685 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 SFMBT1Q9UHJ3 866 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 CEP83Q9Y592 693 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 GPR179Q6PRD1 2367 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 PLXND1Q9Y4D7 1925 aa16.29■□□□□ 0.2
MRPL55-226ENST00000473066 ZBTB24O43167 697 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-226ENST00000473066 KLKB1P03952 638 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 ZNF445P59923 1031 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 MESP2Q0VG99 397 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 RAPGEF1Q13905 1077 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 TRIP4Q15650 581 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-226ENST00000473066 CRY1Q16526 586 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 CCDC183Q5T5S1 534 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 SDE2Q6IQ49 451 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 ANO7Q6IWH7 933 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 CACNA2D4Q7Z3S7 1137 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 CPXM2Q8N436 756 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 IL17RCQ8NAC3 791 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
MRPL55-226ENST00000473066 KCNV2Q8TDN2 545 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 SAMSN1Q9NSI8 373 aaKnown RBP16.28■□□□□ 0.2
MRPL55-226ENST00000473066 BCCIPQ9P287 314 aaKnown RBP eCLIP16.28■□□□□ 0.2
MRPL55-226ENST00000473066 AGO1Q9UL18 857 aaKnown RBP16.28■□□□□ 0.2
MRPL55-226ENST00000473066 SDK1Q7Z5N4 2213 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 NUP205Q92621 2012 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 VPS13AQ96RL7 3174 aa16.28■□□□□ 0.2
MRPL55-226ENST00000473066 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 BECN2A8MW95 431 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 CAPN9O14815 690 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 MSI1O43347 362 aaKnown RBP16.27■□□□□ 0.2
MRPL55-226ENST00000473066 LATS1O95835 1130 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 RETP07949 1114 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 NCAM1P13591 858 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 HOXC13P31276 330 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 GPD2P43304 727 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 KIR2DL1P43626 348 aaPredicted RBP16.27■□□□□ 0.2
MRPL55-226ENST00000473066 SNX16P57768 344 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 BPIFB4P59827 614 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 APBA1Q02410 837 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 E2F5Q15329 346 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 ELF2Q15723 593 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 MIIPQ5JXC2 388 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 NUGGCQ68CJ6 796 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 RBM43Q6ZSC3 357 aaKnown RBP16.27■□□□□ 0.2
MRPL55-226ENST00000473066 C11orf74Q86VG3 221 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 SFTPA1Q8IWL2 248 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 DDI1Q8WTU0 396 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 UCMAQ8WVF2 138 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 SERPINB11Q96P15 392 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 LSM14BQ9BX40 385 aaKnown RBP16.27■□□□□ 0.2
MRPL55-226ENST00000473066 TPSD1Q9BZJ3 242 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 PDCL3Q9H2J4 239 aa16.27■□□□□ 0.2
MRPL55-226ENST00000473066 TAB2Q9NYJ8 693 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms