RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 LRRC39Q96DD0 335 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 PAIP1Q9H074 479 aaKnown RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 IL17RBQ9NRM6 502 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 DDX18Q9NVP1 670 aaKnown RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 UBQLN1Q9UMX0 589 aaKnown RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 ATP6V1C1P21283 382 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 PTPN11Q06124 597 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 FUT11Q495W5 492 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 TCHHL1Q5QJ38 904 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 GRTP1Q5TC63 336 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 CACHD1Q5VU97 1274 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 PRMT9Q6P2P2 845 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 NET1Q7Z628 596 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 ADCK2Q7Z695 626 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SLFN11Q7Z7L1 901 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 FAM9CQ8IZT9 166 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SLITRK1Q96PX8 696 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 KIAA1683Q9H0B3 1180 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 MUC3BQ9H195 1237 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 LRMDAQ9H2I8 198 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 GPATCH2LQ9NWQ4 482 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 DDIT4Q9NX09 232 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 DPP3Q9NY33 737 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 A0A087WXM4 84 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 CHRM3P20309 590 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 AVPR1AP37288 418 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 MLH1P40692 756 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 TWF1Q12792 350 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 PDK4Q16654 411 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 UGT3A1Q6NUS8 523 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 MPZL3Q6UWV2 235 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 DDX53Q86TM3 631 aaKnown RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 CROCCP3Q8IVE0 287 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SLC22A9Q8IVM8 553 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 EMC1Q8N766 993 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 GMCL1P1Q8NEA9 526 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 OTULINQ96BN8 352 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SH3GL1Q99961 368 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SELENONQ9NZV5 590 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SPATA31D1Q6ZQQ2 1576 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 PREX1Q8TCU6 1659 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 NCANO14594 1321 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 KPNA4O00629 521 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 TBC1D12O60347 775 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 ADARP55265 1226 aaKnown RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 UBE3AQ05086 875 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 NAB1Q13506 487 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 B3GNT6Q6ZMB0 384 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 OSCP1Q8WVF1 389 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 USP13Q92995 863 aaPredicted RBP12.37□□□□□ -0.43
SEC16A-207ENST00000453963 SLC7A5P2Q9GIP4 190 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 LRRC19Q9H756 370 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 CROTQ9UKG9 612 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 FRMPD4Q14CM0 1322 aa12.37□□□□□ -0.43
SEC16A-207ENST00000453963 VWA5AO00534 786 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 DDHD2O94830 711 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 GSTT1P30711 240 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SOX6P35712 828 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MMP13P45452 471 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 RNF180Q86T96 592 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 CHSY1Q86X52 802 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 POU5F2Q8N7G0 328 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MAGEC3Q8TD91 643 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 ART4Q93070 314 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 GANQ9H2C0 597 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 WDCPQ9H6R7 721 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 CTNNAL1Q9UBT7 734 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 DEPDC5O75140 1603 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 BCL9O00512 1426 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 OPLAHO14841 1288 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 NCAM2O15394 837 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SERPIND1P05546 499 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 RIPK1Q13546 671 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MAPRE1Q15691 268 aaKnown RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PARP6Q2NL67 630 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 ZNF483Q8TF39 744 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 TRMT6Q9UJA5 497 aaKnown RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 COPG1Q9Y678 874 aaKnown RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SMIM31A0A1B0GVY4 71 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 NR5A2O00482 541 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 ABLIM1O14639 778 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PRRG1O14668 218 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 LIN7AO14910 233 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 CLOCKO15516 846 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 WFS1O76024 890 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 TSHRP16473 764 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 EPHX2P34913 555 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 BLVRAP53004 296 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MYL6P60660 151 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms