RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 ZNF544Q6NX49 715 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 EXOC3L1Q86VI1 746 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 MCOLN2Q8IZK6 566 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 CACNA2D2Q9NY47 1150 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 MRASO14807 208 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 SNX3O60493 162 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 MYL4P12829 197 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 CD151P48509 253 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 SLC11A2P49281 568 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 SLC16A1P53985 500 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 Q4G0T1 1027 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 CYP4F12Q9HCS2 524 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 INTS13Q9NVM9 706 aa13.7□□□□□ -0.22
PRDM15-206ENST00000447016 KATNA1O75449 491 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 MSH3P20585 1137 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CYP24A1Q07973 514 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 MSLNQ13421 630 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 BMPR2Q13873 1038 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 USP39Q53GS9 565 aaKnown RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 PDZK1Q5T2W1 519 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 RNF43Q68DV7 783 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 NT5DC3Q86UY8 548 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 DEPDC7Q96QD5 511 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CBWD1Q9BRT8 395 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SLC7A5P2Q9GIP4 190 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ETAA1Q9NY74 926 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 VANGL2Q9ULK5 521 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 KRT6AP02538 564 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 KRT6BP04259 564 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ITGALP20701 1170 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 KRT6CP48668 564 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CSHL1Q14406 222 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 MPZL3Q6UWV2 235 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 DDX53Q86TM3 631 aaKnown RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CLEC10AQ8IUN9 316 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 FNIP1Q8TF40 1166 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SLC5A5Q92911 643 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CLPBQ9H078 707 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 LINC00854A0A1B0GVQ3 168 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 FAM220BPB1ANY3 271 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CD3EAPO15446 510 aaKnown RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ATG7O95352 703 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 GLP2RO95838 553 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 FAM153BP0C7A2 387 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CHI3L1P36222 383 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 IFI35P80217 286 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CNGA2Q16280 664 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 FAM153CQ494X1 144 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SPANXN3Q5MJ09 141 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 RIPOR1Q6ZS17 1223 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ARHGEF19Q8IW93 802 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CPNE1Q99829 537 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SERHL2Q9H4I8 314 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 KLHL31Q9H511 634 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SERHLQ9NQF3 203 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 COMMD3-BMI1R4GMX3 469 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CDC42BPBQ9Y5S2 1711 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 MGAT4DA6NG13 374 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 BAIAP3O94812 1187 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 UNC5CO95185 931 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CYP2C9P11712 490 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 PGAM1P18669 254 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 NPTX2P47972 431 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 NPY2RP49146 381 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 CDH17Q12864 832 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ZNF177Q13360 481 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 TOP3AQ13472 1001 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 FASTKQ14296 549 aaKnown RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 GLRA4Q5JXX5 417 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 C10orf120Q5SQS8 335 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 ZCCHC9Q8N567 271 aaKnown RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 TAS1R2Q8TE23 839 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 TRPC7Q9HCX4 862 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 C6orf203Q9P0P8 240 aaPredicted RBP13.69□□□□□ -0.22
PRDM15-206ENST00000447016 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 PCDHGC5Q9Y5F6 944 aa13.69□□□□□ -0.22
PRDM15-206ENST00000447016 LRRC10BA6NIK2 292 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 H7C0S8 307 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 ODC1P11926 461 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 PECAM1P16284 738 aaPredicted RBP13.68□□□□□ -0.22
PRDM15-206ENST00000447016 POU1F1P28069 291 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 NET1Q7Z628 596 aaPredicted RBP13.68□□□□□ -0.22
PRDM15-206ENST00000447016 COLGALT1Q8NBJ5 622 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 SLC20A1Q8WUM9 679 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 TMEM237Q96Q45 408 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 SPRTNQ9H040 489 aaPredicted RBP13.68□□□□□ -0.22
PRDM15-206ENST00000447016 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 PRDM16Q9HAZ2 1276 aa13.68□□□□□ -0.22
PRDM15-206ENST00000447016 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms