RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
PRDM15-206ENST00000447016 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
PRDM15-206ENST00000447016 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
PRDM15-206ENST00000447016 NISCHQ9Y2I1 1504 aa21.05■□□□□ 0.96
PRDM15-206ENST00000447016 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
PRDM15-206ENST00000447016 APLP2Q06481 763 aa20.74■□□□□ 0.91
PRDM15-206ENST00000447016 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
PRDM15-206ENST00000447016 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
PRDM15-206ENST00000447016 MYT1Q01538 1121 aa20.59■□□□□ 0.89
PRDM15-206ENST00000447016 ZEB1P37275 1124 aaPredicted RBP20.59■□□□□ 0.89
PRDM15-206ENST00000447016 PCGF6Q9BYE7 350 aa20.52■□□□□ 0.88
PRDM15-206ENST00000447016 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
PRDM15-206ENST00000447016 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
PRDM15-206ENST00000447016 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
PRDM15-206ENST00000447016 NEFLP07196 543 aa20.08■□□□□ 0.81
PRDM15-206ENST00000447016 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
PRDM15-206ENST00000447016 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
PRDM15-206ENST00000447016 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
PRDM15-206ENST00000447016 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
PRDM15-206ENST00000447016 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
PRDM15-206ENST00000447016 HRCP23327 699 aa19.71■□□□□ 0.75
PRDM15-206ENST00000447016 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
PRDM15-206ENST00000447016 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
PRDM15-206ENST00000447016 DAXXQ9UER7 740 aaPredicted RBP19.5■□□□□ 0.71
PRDM15-206ENST00000447016 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
PRDM15-206ENST00000447016 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
PRDM15-206ENST00000447016 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
PRDM15-206ENST00000447016 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
PRDM15-206ENST00000447016 HNRNPUL2Q1KMD3 747 aaKnown RBP19.08■□□□□ 0.64
PRDM15-206ENST00000447016 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
PRDM15-206ENST00000447016 ITGAEP38570 1179 aa19.07■□□□□ 0.64
PRDM15-206ENST00000447016 POLR3GLQ9BT43 218 aa19.05■□□□□ 0.64
PRDM15-206ENST00000447016 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
PRDM15-206ENST00000447016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
PRDM15-206ENST00000447016 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
PRDM15-206ENST00000447016 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
PRDM15-206ENST00000447016 MYT1LQ9UL68 1186 aa18.79■□□□□ 0.6
PRDM15-206ENST00000447016 CDK11AQ9UQ88 783 aaPredicted RBP18.79■□□□□ 0.6
PRDM15-206ENST00000447016 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.59
PRDM15-206ENST00000447016 ANP32CO43423 234 aa18.71■□□□□ 0.59
PRDM15-206ENST00000447016 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
PRDM15-206ENST00000447016 BCANQ96GW7 911 aa18.65■□□□□ 0.58
PRDM15-206ENST00000447016 FAM50AQ14320 339 aaKnown RBP18.62■□□□□ 0.57
PRDM15-206ENST00000447016 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
PRDM15-206ENST00000447016 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
PRDM15-206ENST00000447016 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
PRDM15-206ENST00000447016 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
PRDM15-206ENST00000447016 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
PRDM15-206ENST00000447016 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
PRDM15-206ENST00000447016 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
PRDM15-206ENST00000447016 ANP32BQ92688 251 aaKnown RBP18.26■□□□□ 0.51
PRDM15-206ENST00000447016 NEFMP07197 916 aa18.24■□□□□ 0.51
PRDM15-206ENST00000447016 GLIPR1L2Q4G1C9 344 aa18.24■□□□□ 0.51
PRDM15-206ENST00000447016 FKBP8Q14318 412 aa18.22■□□□□ 0.51
PRDM15-206ENST00000447016 EIF5BO60841 1220 aaKnown RBP18.21■□□□□ 0.51
PRDM15-206ENST00000447016 NPM2Q86SE8 214 aaKnown RBP18.18■□□□□ 0.5
PRDM15-206ENST00000447016 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
PRDM15-206ENST00000447016 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
PRDM15-206ENST00000447016 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
PRDM15-206ENST00000447016 HNRNPUQ00839 825 aaKnown RBP eCLIP18.08■□□□□ 0.48
PRDM15-206ENST00000447016 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
PRDM15-206ENST00000447016 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
PRDM15-206ENST00000447016 CCDC136Q96JN2 1154 aa18■□□□□ 0.47
PRDM15-206ENST00000447016 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
PRDM15-206ENST00000447016 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
PRDM15-206ENST00000447016 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
PRDM15-206ENST00000447016 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
PRDM15-206ENST00000447016 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
PRDM15-206ENST00000447016 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
PRDM15-206ENST00000447016 NBR1Q14596 966 aa17.89■□□□□ 0.45
PRDM15-206ENST00000447016 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
PRDM15-206ENST00000447016 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRDM15-206ENST00000447016 P3H3Q8IVL6 736 aa17.87■□□□□ 0.45
PRDM15-206ENST00000447016 ANP32EQ9BTT0 268 aa17.84■□□□□ 0.45
PRDM15-206ENST00000447016 DDRGK1Q96HY6 314 aa17.81■□□□□ 0.44
PRDM15-206ENST00000447016 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
PRDM15-206ENST00000447016 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
PRDM15-206ENST00000447016 FBLN2P98095 1184 aa17.79■□□□□ 0.44
PRDM15-206ENST00000447016 MIER1Q8N108 512 aa17.79■□□□□ 0.44
PRDM15-206ENST00000447016 ABCC9O60706 1549 aa17.77■□□□□ 0.44
PRDM15-206ENST00000447016 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
PRDM15-206ENST00000447016 BECN1Q14457 450 aa17.74■□□□□ 0.43
PRDM15-206ENST00000447016 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
PRDM15-206ENST00000447016 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
PRDM15-206ENST00000447016 TRIM44Q96DX7 344 aaPredicted RBP17.68■□□□□ 0.42
PRDM15-206ENST00000447016 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
PRDM15-206ENST00000447016 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.426e-7■■■■■ 40.3
PRDM15-206ENST00000447016 GOLGA6L22H0YM25 854 aa17.64■□□□□ 0.41
PRDM15-206ENST00000447016 ARXQ96QS3 562 aa17.64■□□□□ 0.41
PRDM15-206ENST00000447016 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
PRDM15-206ENST00000447016 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
PRDM15-206ENST00000447016 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
PRDM15-206ENST00000447016 TNNT2P45379 298 aaPredicted RBP17.6■□□□□ 0.41
PRDM15-206ENST00000447016 CHGAP10645 457 aaKnown RBP17.59■□□□□ 0.41
PRDM15-206ENST00000447016 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
PRDM15-206ENST00000447016 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
PRDM15-206ENST00000447016 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
PRDM15-206ENST00000447016 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
PRDM15-206ENST00000447016 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
PRDM15-206ENST00000447016 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms