RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 TRPC3Q13507 836 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 ZNF234Q14588 700 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 PTPRNQ16849 979 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 KIF19Q2TAC6 998 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 CCDC157Q569K6 752 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 CCDC73Q6ZRK6 1079 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 FAM124AQ86V42 546 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 NELFCDQ8IXH7 590 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 C12orf29Q8N999 325 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 ZNF507Q8TCN5 953 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 SLC2A14Q8TDB8 520 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 JAKMIP2Q96AA8 810 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 C6orf106Q9H6K1 298 aaPredicted RBP14.28□□□□□ -0.12
VEGFB-202ENST00000426086 TLR8Q9NR97 1041 aaKnown RBP14.28□□□□□ -0.12
VEGFB-202ENST00000426086 FAM49BQ9NUQ9 324 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 CELSR3Q9NYQ7 3312 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
VEGFB-202ENST00000426086 ANKRD11Q6UB99 2663 aaPredicted RBP14.28□□□□□ -0.12
VEGFB-202ENST00000426086 NUMA1Q14980 2115 aa14.27□□□□□ -0.12
VEGFB-202ENST00000426086 CKAP5Q14008 2032 aa14.27□□□□□ -0.12
VEGFB-202ENST00000426086 ATP8B3O60423 1300 aa14.27□□□□□ -0.12
VEGFB-202ENST00000426086 A0A1W2PQH9 124 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.13
VEGFB-202ENST00000426086 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.13
VEGFB-202ENST00000426086 IGLV3-19P01714 112 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 ATICP31939 592 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 ACSL1P33121 698 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 STARD3Q14849 445 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 TMEM215Q68D42 235 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 DHRS13Q6UX07 377 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 SCUBE3Q8IX30 993 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 PIP4K2CQ8TBX8 421 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 SYAP1Q96A49 352 aaPredicted RBP14.27□□□□□ -0.13
VEGFB-202ENST00000426086 PIWIL1Q96J94 861 aaKnown RBP14.27□□□□□ -0.13
VEGFB-202ENST00000426086 CDC6Q99741 560 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 VRTNQ9H8Y1 702 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.13
VEGFB-202ENST00000426086 LSM7Q9UK45 103 aaKnown RBP14.27□□□□□ -0.13
VEGFB-202ENST00000426086 PCDHGB2Q9Y5G2 931 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 SHROOM3Q8TF72 1996 aa14.27□□□□□ -0.13
VEGFB-202ENST00000426086 ASXL3Q9C0F0 2248 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 MYH10P35580 1976 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 CYSRT1A8MQ03 144 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
VEGFB-202ENST00000426086 PHACTR2O75167 634 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 C4BPAP04003 597 aaKnown RBP14.26□□□□□ -0.13
VEGFB-202ENST00000426086 RARGP13631 454 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 HLA-EP13747 358 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 ADORA2BP29275 332 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 CASP1P29466 404 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 TXLNAP40222 546 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 NDST1P52848 882 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 SMAD1Q15797 465 aaKnown RBP14.26□□□□□ -0.13
VEGFB-202ENST00000426086 E2F4Q16254 413 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 ZNF699Q32M78 642 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 ZNF667Q5HYK9 610 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 IL27RAQ6UWB1 636 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 CLEC20AQ6ZU45 233 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 SCD5Q86SK9 330 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 XXYLT1Q8NBI6 393 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 SNX19Q92543 992 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
VEGFB-202ENST00000426086 TNIP3Q96KP6 325 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 TWNKQ96RR1 684 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 FBXO44Q9H4M3 255 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 SCML2Q9UQR0 700 aa14.26□□□□□ -0.13
VEGFB-202ENST00000426086 MUC22E2RYF6 1773 aaPredicted RBP14.25□□□□□ -0.13
VEGFB-202ENST00000426086 IGSF10Q6WRI0 2623 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 LRRIQ3A6PVS8 624 aaPredicted RBP14.25□□□□□ -0.13
VEGFB-202ENST00000426086 H0Y8X5 98 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 CBX4O00257 560 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 PLK4O00444 970 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 TNFSF14O43557 240 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 TLX3O43711 291 aaPredicted RBP14.25□□□□□ -0.13
VEGFB-202ENST00000426086 PLA2G4AP47712 749 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 IL9RQ01113 521 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 BIRC3Q13489 604 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 C10orf120Q5SQS8 335 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 SPOPLQ6IQ16 392 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 STXBP4Q6ZWJ1 553 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 GALNT15Q8N3T1 639 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 ZNF366Q8N895 744 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 NUP58Q9BVL2 599 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 TM9SF3Q9HD45 589 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.25□□□□□ -0.133e-12■■■■■ 101
VEGFB-202ENST00000426086 KBTBD4Q9NVX7 518 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 DNMT3LQ9UJW3 386 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 ANKRD6Q9Y2G4 727 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 RAI2Q9Y5P3 530 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 GTF3C3Q9Y5Q9 886 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 LAMA5O15230 3695 aa14.25□□□□□ -0.13
VEGFB-202ENST00000426086 GOLGA4Q13439 2230 aaKnown RBP14.25□□□□□ -0.13
VEGFB-202ENST00000426086 SYNCRIPO60506 623 aaKnown RBP14.24□□□□□ -0.13
VEGFB-202ENST00000426086 EPHX1P07099 455 aa14.24□□□□□ -0.13
VEGFB-202ENST00000426086 HMBSP08397 361 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms