RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZDHHC12Q96GR4 267 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 MEIS3Q99687 375 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 NTPCRQ9BSD7 190 aaKnown RBP5.64□□□□□ -1.51
LINC01040-201ENST00000425048 C22orf23Q9BZE7 217 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 MSRB1Q9NZV6 116 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 RGS17Q9UGC6 210 aaPredicted RBP5.64□□□□□ -1.51
LINC01040-201ENST00000425048 AFF4Q9UHB7 1163 aaKnown RBP5.64□□□□□ -1.51
LINC01040-201ENST00000425048 TPCN1Q9ULQ1 816 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 PCDHA12Q9UN75 941 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 TMEM272A0A1B0GTI8 110 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 SLC22A23A1A5C7 686 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 CFAP69A5D8W1 941 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 PRPF4O43172 522 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 MYBP10242 640 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 TXNP10599 105 aaKnown RBP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 BTF3P20290 206 aaKnown RBP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 WDR5P61964 334 aaKnown RBP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 MTA1Q13330 715 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 DNASE1L3Q13609 305 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 ASIC2Q16515 512 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 C3orf38Q5JPI3 329 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 RBM44Q6ZP01 1051 aaKnown RBP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 USP43Q70EL4 1123 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 TFAP2DQ7Z6R9 452 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 P3H2Q8IVL5 708 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 UEVLDQ8IX04 471 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 ZBTB8BQ8NAP8 495 aaPredicted RBP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 CHST8Q9H2A9 424 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 TMEM60Q9H2L4 133 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 PAPOLBQ9NRJ5 636 aaKnown RBP5.63□□□□□ -1.51
LINC01040-201ENST00000425048 SELENONQ9NZV5 590 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 MID2Q9UJV3 735 aa5.63□□□□□ -1.51
LINC01040-201ENST00000425048 C16orf96A6NNT2 1141 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 FAM227AF5H4B4 570 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 MBPP02686 304 aaPredicted RBP5.62□□□□□ -1.51
LINC01040-201ENST00000425048 RBL1P28749 1068 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 COPAP53621 1224 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 CNGA2Q16280 664 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 KRTAP27-1Q3LI81 207 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 EPM2AIP1Q7L775 607 aaPredicted RBP5.62□□□□□ -1.51
LINC01040-201ENST00000425048 TMEM199Q8N511 208 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 PRR11Q96HE9 360 aaPredicted RBP5.62□□□□□ -1.51
LINC01040-201ENST00000425048 BRINP2Q9C0B6 783 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 TXLNGQ9NUQ3 528 aa5.62□□□□□ -1.51
LINC01040-201ENST00000425048 TRBV5-3A0A0A0MS03 114 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 FRS3O43559 492 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 IBSPP21815 317 aaPredicted RBP5.61□□□□□ -1.51
LINC01040-201ENST00000425048 COL15A1P39059 1388 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 POLD2P49005 469 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 PPATQ06203 517 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 MCL1Q07820 350 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 PTGR1Q14914 329 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 TTF1Q15361 905 aaPredicted RBP5.61□□□□□ -1.51
LINC01040-201ENST00000425048 ZNF628Q5EBL2 1059 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 PLAG1Q6DJT9 500 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 SWSAP1Q6NVH7 229 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 KIAA0319LQ8IZA0 1049 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 ADGRF4Q8IZF3 695 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 FSTL5Q8N475 847 aaPredicted RBP5.61□□□□□ -1.51
LINC01040-201ENST00000425048 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.61□□□□□ -1.51
LINC01040-201ENST00000425048 IPCEF1Q8WWN9 437 aaPredicted RBP5.61□□□□□ -1.51
LINC01040-201ENST00000425048 FAM84BQ96KN1 310 aaPredicted RBP5.61□□□□□ -1.51
LINC01040-201ENST00000425048 ARHGAP39Q9C0H5 1083 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 VPS51Q9UID3 782 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 L1RE1Q9UN81 338 aa5.61□□□□□ -1.51
LINC01040-201ENST00000425048 UGDHO60701 494 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 TFEBP19484 476 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 TNFRSF8P28908 595 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 KCNJ4P48050 445 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 P2RX3P56373 397 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 RPS16P62249 146 aaKnown RBP5.6□□□□□ -1.51
LINC01040-201ENST00000425048 FMO1Q01740 532 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 KCNAB1Q14722 419 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 CNN3Q15417 329 aaKnown RBP5.6□□□□□ -1.51
LINC01040-201ENST00000425048 INPP5JQ15735 1006 aaPredicted RBP5.6□□□□□ -1.51
LINC01040-201ENST00000425048 CNGA3Q16281 694 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 PTPROQ16827 1216 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 MANEALQ5VSG8 457 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 GRHL2Q6ISB3 625 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 APOA5Q6Q788 366 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 TRAPPC11Q7Z392 1133 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 PPP1R10Q96QC0 940 aaKnown RBP5.6□□□□□ -1.51
LINC01040-201ENST00000425048 SAP30LQ9HAJ7 183 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 MOV10Q9HCE1 1003 aaKnown RBP5.6□□□□□ -1.51
LINC01040-201ENST00000425048 FZD3Q9NPG1 666 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 ANAPC4Q9UJX5 808 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 ITGB1BP2Q9UKP3 347 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 CAPN11Q9UMQ6 739 aa5.6□□□□□ -1.51
LINC01040-201ENST00000425048 A0A1W2PPC1 479 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 CYSRT1A8MQ03 144 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 TTC34A8MYJ7 566 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 SPTLC2O15270 562 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 RFPL1O75677 317 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 ST6GAL1P15907 406 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 ARRB2P32121 409 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 IDUAP35475 653 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 RAB27AP51159 221 aa5.59□□□□□ -1.51
LINC01040-201ENST00000425048 CAPRIN2Q6IMN6 1127 aaKnown RBP5.59□□□□□ -1.51
LINC01040-201ENST00000425048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.59□□□□□ -1.51
LINC01040-201ENST00000425048 FBXL14Q8N1E6 418 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms