RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 TMEM39AQ9NV64 488 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 H2AFY2Q9P0M6 372 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ZMYND8Q9ULU4 1186 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 STXBP5LQ9Y2K9 1186 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 GMEB1Q9Y692 573 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 PIAS3Q9Y6X2 628 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 KIF7Q2M1P5 1343 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 DUOX1Q9NRD9 1551 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 PSME4Q14997 1843 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TAF1P21675 1872 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ALPK3Q96L96 1907 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TRANK1O15050 2925 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 SCN9AQ15858 1988 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 CFAP54Q96N23 3096 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ST20-MTHFSA0A0A6YYL1 179 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 A0A1W2PRV1 198 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 MAGEB16A2A368 324 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 OR6C74A6NCV1 312 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TTLL8A6PVC2 850 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 A8MXE2 369 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 STX16-NPEPL1H3BU86 382 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 KIAA0355O15063 1070 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TBX1O43435 398 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ADAM20O43506 726 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TNFRSF6BO95407 300 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 CSF1P09603 554 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 GAAP10253 952 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ABCD3P28288 659 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ALDH4A1P30038 563 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TXLNAP40222 546 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 MAGEA4P43358 317 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 AFMP43652 599 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 PITPNBP48739 271 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 MTHFSP49914 203 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 GMPSP49915 693 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ZNF157P51786 506 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 EIF4A1P60842 406 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 B2MP61769 119 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 NOP14P78316 857 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 CHRNDQ07001 517 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 BTG3Q14201 252 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 GNA13Q14344 377 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TRIP4Q15650 581 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TBCEQ15813 527 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TCP11X2Q5H9J9 407 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 ZBTB41Q5SVQ8 909 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 FAXCQ5TGI0 409 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 C12orf60Q5U649 245 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 DIEXFQ68CQ4 756 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 C6orf89Q6UWU4 347 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 OTOP1Q7RTM1 612 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 CACNA2D4Q7Z3S7 1137 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 STK32CQ86UX6 486 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 COMTD1Q86VU5 262 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 SLC22A9Q8IVM8 553 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 CARFQ8N187 725 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 XXYLT1Q8NBI6 393 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 OR10H5Q8NGA6 315 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 FIBINQ8TAL6 211 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 GANCQ8TET4 914 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 AFG1LQ8WV93 481 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 RIN2Q8WYP3 895 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 SPACA9Q96E40 222 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 RBM17Q96I25 401 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 NECAB3Q96P71 396 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 FAM111AQ96PZ2 611 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 PKP4Q99569 1192 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 LLPHQ9BRT6 129 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 SPZ1Q9BXG8 430 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 PUS3Q9BZE2 481 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TRIM2Q9C040 744 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 FTOQ9C0B1 505 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 SEMA6BQ9H3T3 888 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 DENND2DQ9H6A0 471 aaPredicted RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 SDHAF3Q9NRP4 125 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 INTS13Q9NVM9 706 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 UCKL1Q9NWZ5 548 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 POLKQ9UBT6 870 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 MORF4L1Q9UBU8 362 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 FNDC3AQ9Y2H6 1198 aaKnown RBP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 TRAF6Q9Y4K3 522 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 PCDHA9Q9Y5H5 950 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 NPFFR2Q9Y5X5 522 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLHC1-201ENST00000401408 WDR87Q6ZQQ6 2873 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 LRRC37AA6NMS7 1700 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 NUP98P52948 1817 aa4.1□□□□□ -1.75
CLHC1-201ENST00000401408 HMX3A6NHT5 357 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 F8W8V4 182 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 H3BNC9 293 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 KRIT1O00522 736 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 ZNF609O15014 1411 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 SULT1B1O43704 296 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 CIDEAO60543 219 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 RECQL4O94761 1208 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 IL18RAPO95256 599 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 EGFRP00533 1210 aa4.09□□□□□ -1.75
CLHC1-201ENST00000401408 TUBB4AP04350 444 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms