RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZNF534Q76KX8 674 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 POU5F2Q8N7G0 328 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 STMN2Q93045 179 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 DLGAP2Q9P1A6 1054 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 BARX2Q9UMQ3 279 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 IRF6O14896 467 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 LUC7L3O95232 432 aaKnown RBP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 KCNA4P22459 653 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 SDC4P31431 198 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 RPL10AP62906 217 aaKnown RBP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 OLIG2Q13516 323 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 FAM47CQ5HY64 1035 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 KBTBD2Q8IY47 623 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 PHACTR1Q9C0D0 580 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 DPP3Q9NY33 737 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 STOML1Q9UBI4 398 aa20.23■□□□□ 0.83
COL13A1-205ENST00000398978 CORO1CQ9ULV4 474 aaPredicted RBP20.23■□□□□ 0.83
COL13A1-205ENST00000398978 ITM2AO43736 263 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 USP1O94782 785 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 IL18RAPO95256 599 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 HDAC4P56524 1084 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 LRRC74BQ6ZQY2 392 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 MAP7D3Q8IWC1 876 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 LMNTD2Q8IXW0 634 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 DEPDC1BQ8WUY9 529 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 KHSRPQ92945 711 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL13A1-205ENST00000398978 KIF12Q96FN5 646 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 DPEP3Q9H4B8 488 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 ELP3Q9H9T3 547 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 HES2Q9Y543 173 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 TNS1Q9HBL0 1735 aaKnown RBP20.22■□□□□ 0.83
COL13A1-205ENST00000398978 WDR27A2RRH5 827 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 EME2A4GXA9 379 aaPredicted RBP20.22■□□□□ 0.83
COL13A1-205ENST00000398978 A6NHS1 94 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 ZNF286BP0CG31 522 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 VHLP40337 213 aa20.22■□□□□ 0.83
COL13A1-205ENST00000398978 SESN2P58004 480 aaPredicted RBP20.22■□□□□ 0.83
COL13A1-205ENST00000398978 GBA2Q9HCG7 927 aaPredicted RBP20.22■□□□□ 0.83
COL13A1-205ENST00000398978 PAPSS1O43252 624 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-205ENST00000398978 DNAJC6O75061 913 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 TGFB3P10600 412 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 LCP1P13796 627 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 KCNT2Q6UVM3 1135 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 ADGRF2Q8IZF7 708 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 EFCAB3Q8N7B9 438 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 PPP1R14CQ8TAE6 165 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 CLMNQ96JQ2 1002 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 SIGLEC10Q96LC7 697 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 TTC1Q99614 292 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 NT5C1AQ9BXI3 368 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 SORBS2O94875 1100 aaKnown RBP20.21■□□□□ 0.83
COL13A1-205ENST00000398978 TGDSO95455 350 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 PDGFRBP09619 1106 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 ADORA2BP29275 332 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 OLFML1Q6UWY5 402 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 SMC1BQ8NDV3 1235 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 ATXN7L3BQ96GX2 97 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 DDX50Q9BQ39 737 aaKnown RBP20.21■□□□□ 0.83
COL13A1-205ENST00000398978 NRDE2Q9H7Z3 1164 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.21■□□□□ 0.83
COL13A1-205ENST00000398978 BAG2O95816 211 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 GTF2A2P52657 109 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 PEX6Q13608 980 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 RSPH3Q86UC2 560 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 APOBEC3FQ8IUX4 373 aaKnown RBP20.21■□□□□ 0.83
COL13A1-205ENST00000398978 USP6NLQ92738 828 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 LGMNQ99538 433 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 PIDD1Q9HB75 910 aa20.21■□□□□ 0.83
COL13A1-205ENST00000398978 CCDC189A1A4V9 331 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 PSEN1P49768 467 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 OCRLQ01968 901 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 TEX44Q53QW1 395 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 CCDC185Q8N715 623 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 CFAP61Q8NHU2 1237 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 NLRP7Q8WX94 980 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 ACSS2Q9NR19 701 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 LGR5O75473 907 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 C22orf31O95567 290 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 SLC34A1Q06495 639 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 RNF220Q5VTB9 566 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 LCLAT1Q6UWP7 414 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 ATG14Q6ZNE5 492 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 PHC3Q8NDX5 983 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 SEPT10Q9P0V9 454 aa20.2■□□□□ 0.82
COL13A1-205ENST00000398978 E7ENQ6 273 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 PRKCHP24723 683 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 KLC1Q07866 573 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 PPM1JQ5JR12 505 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 STKLD1Q8NE28 680 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 PSAT1Q9Y617 370 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 SMAPO00193 183 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 CCDC130P13994 396 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 ABCG1P45844 678 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 SLC25A3Q00325 362 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 ACAP1Q15027 740 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 SPDYAQ5MJ70 313 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 CRLF3Q8IUI8 442 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 PANX3Q96QZ0 392 aa20.19■□□□□ 0.82
COL13A1-205ENST00000398978 ZNF358Q9NW07 568 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms