RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MAML3Q96JK9 1138 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 SAC3D1A6NKF1 404 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 SERPINI2O75830 405 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
LCA5-202ENST00000392959 CDK16Q00536 496 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CDH18Q13634 790 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CBWD6Q4V339 395 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CBWD3Q5JTY5 395 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 CBWD5Q5RIA9 395 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 IRGCQ6NXR0 463 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 LPCAT2Q7L5N7 544 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 TSPAN16Q9UKR8 245 aa13.48□□□□□ -0.25
LCA5-202ENST00000392959 A0A096LPK6 155 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 CD151P48509 253 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 CDH17Q12864 832 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 PWP1Q13610 501 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 CKAP2Q8WWK9 683 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SPATA16Q9BXB7 569 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 GANQ9H2C0 597 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 MMADHCQ9H3L0 296 aaPredicted RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 RBM22Q9NW64 420 aaKnown RBP eCLIP13.47□□□□□ -0.25
LCA5-202ENST00000392959 NMRK1Q9NWW6 199 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 HACL1Q9UJ83 578 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 BARX2Q9UMQ3 279 aaPredicted RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 F5H5T6 163 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 TOMM70O94826 608 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 UPP2O95045 317 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 GLP2RO95838 553 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 ALADP13716 330 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 ME2P23368 584 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 RRP1BQ14684 758 aaKnown RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 MREGQ8N565 214 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SIKE1Q9BRV8 207 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 CLPBQ9H078 707 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 CROTQ9UKG9 612 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 ERI2A8K979 691 aaKnown RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 TBC1D12O60347 775 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 TNFRSF8P28908 595 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SHMT1P34896 483 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 KRR1Q13601 381 aaKnown RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 POU6F1Q14863 301 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SLC45A4Q5BKX6 768 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 ILDR2Q71H61 639 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 MYO1HQ8N1T3 1032 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 MSL3Q8N5Y2 521 aaKnown RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 BTN2A2Q8WVV5 523 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 HTR3CQ8WXA8 447 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 VTI1BQ9UEU0 232 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 KCNH4Q9UQ05 1017 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 A0A087WZ62 844 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 PLA2G6O60733 806 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SNUPNO95149 360 aaKnown RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 YY1P25490 414 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 MAPK1P28482 360 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 FBXO47Q5MNV8 452 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 WDR59Q6PJI9 974 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 VPS33AQ96AX1 596 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 PHF21BQ96EK2 531 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 RMND5BQ96G75 393 aaPredicted RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 FDXACB1Q9BRP7 624 aaPredicted RBP13.47□□□□□ -0.25
LCA5-202ENST00000392959 CEP41Q9BYV8 373 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 RNPEPL1Q9HAU8 725 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 GIMAP4Q9NUV9 329 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
LCA5-202ENST00000392959 CCL15-CCL14A0A0B4J2E2 113 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 A0A1B0GW55 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 ZNF839A8K0R7 811 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DCXO43602 365 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 TNFAIP8O95379 198 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 VTNP04004 478 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 CPT1AP50416 773 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 TRAF2Q12933 501 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 CCL15Q16663 113 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 GRTP1Q5TC63 336 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 NSMCE2Q96MF7 247 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 TRAPPC9Q96Q05 1148 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 KLHL25Q9H0H3 589 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 UTP6Q9NYH9 597 aaKnown RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 DUX4Q9UBX2 424 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 SLIT1O75093 1534 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 APOC4-APOC2K7ER74 178 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 CRTAMO95727 393 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 APOC2P02655 101 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 ATP5BP06576 529 aaKnown RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 ALOX15P16050 662 aaPredicted RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 TKTL1P51854 596 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms