RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ATG9AQ7Z3C6 839 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 SLC22A16Q86VW1 577 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 CADM2Q8N3J6 435 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 CCDC33Q8N5R6 958 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
NHLRC3-201ENST00000379599 TMA16Q96EY4 203 aaKnown RBP8.78□□□□□ -1
NHLRC3-201ENST00000379599 CALML4Q96GE6 196 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 PKP2Q99959 881 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 TARS2Q9BW92 718 aaKnown RBP8.78□□□□□ -1
NHLRC3-201ENST00000379599 UBA2Q9UBT2 640 aaPredicted RBP8.78□□□□□ -1
NHLRC3-201ENST00000379599 DNM3Q9UQ16 869 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
NHLRC3-201ENST00000379599 DIP2CQ9Y2E4 1556 aa8.77□□□□□ -1
NHLRC3-201ENST00000379599 ZNF701M0R085 212 aaPredicted RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 TK2O00142 265 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 GPC4O75487 556 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 EPHA3P29320 983 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 GJC1P36383 396 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 MCAMP43121 646 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 SLC26A2P50443 739 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CETN1Q12798 172 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 PMS2P3Q13401 168 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 DPYSQ14117 519 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 NPY5RQ15761 445 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 ATG16L1Q676U5 607 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CAND1Q86VP6 1230 aaKnown RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CHERPQ8IWX8 916 aaKnown RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 XAGE3Q8WTP9 111 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 TRIM63Q969Q1 353 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 METTL2AQ96IZ6 378 aaKnown RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 ZSCAN5AQ9BUG6 496 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CHID1Q9BWS9 393 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 RMND5AQ9H871 391 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 MAGEF1Q9HAY2 307 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 SCPEP1Q9HB40 452 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 KCNQ5Q9NR82 932 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 OLAHQ9NV23 265 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 TAS2R14Q9NYV8 317 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 WNK3Q9BYP7 1800 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 ESYT2A0FGR8 921 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 MT-ND3P03897 115 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 GSTM1P09488 218 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CALM1P0DP23 149 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CALM2P0DP24 149 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CALM3P0DP25 149 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 FGFR3P22607 806 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 CCNCP24863 283 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 KRT20P35900 424 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 TECP42680 631 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 PTPN9P43378 593 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 HK2P52789 917 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 GJA9P57773 515 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 FLOT2Q14254 428 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 FASTKD3Q14CZ7 662 aaKnown RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 TBCCQ15814 346 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 COPS6Q7L5N1 327 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 USP37Q86T82 979 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 SAMD14Q8IZD0 417 aaPredicted RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 FIBCD1Q8N539 461 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 ZNF276Q8N554 614 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 BEND7Q8N7W2 519 aaPredicted RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 SLC4A11Q8NBS3 891 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 ANKRD49Q8WVL7 239 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 KCNK16Q96T55 309 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 TMEM246Q9BRR3 403 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 MTG1Q9BT17 334 aaPredicted RBP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 HEMGNQ9BXL5 484 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 HMG20AQ9NP66 347 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 ADPRHL2Q9NX46 363 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 DGKBQ9Y6T7 804 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1.01
NHLRC3-201ENST00000379599 E9PMD0 336 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 TM9SF1O15321 606 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 CCNKO75909 580 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 IVDP26440 423 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 GABRB3P28472 473 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 NMT1P30419 496 aaKnown RBP8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 GNL1P36915 607 aaPredicted RBP8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 MLLT6P55198 1093 aaPredicted RBP8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 GALK2Q01415 458 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 TAGLNQ01995 201 aaKnown RBP8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 RAB39AQ14964 217 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 CYP1B1Q16678 543 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 PPP1R3AQ16821 1122 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 CEP55Q53EZ4 464 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 PPP4R4Q6NUP7 873 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 PGM2L1Q6PCE3 622 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 IDO2Q6ZQW0 420 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 CPNE8Q86YQ8 564 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 LEMD2Q8NC56 503 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 HM13Q8TCT9 377 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 ZUFSPQ96AP4 578 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 ZNF347Q96SE7 839 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 EBF4Q9BQW3 602 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 IER2Q9BTL4 223 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 EMILIN2Q9BXX0 1053 aa8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.76□□□□□ -1.01
NHLRC3-201ENST00000379599 ZHX3Q9H4I2 956 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms