RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RALGAPA1Q6GYQ0 2036 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 KCNJ18B7U540 433 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 PIK3R2O00459 728 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 SART1O43290 800 aaKnown RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 HRO43593 1189 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 MBD3O95983 291 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 EEF1GP26641 437 aaKnown RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 USP8P40818 1118 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 ACADSBP45954 432 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 PXNP49023 591 aaPredicted RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 HARS2P49590 506 aaKnown RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 MESP2Q0VG99 397 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 KCNJ12Q14500 433 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 HSP90AA4PQ58FG1 418 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 RBM43Q6ZSC3 357 aaKnown RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 GPR161Q8N6U8 529 aaKnown RBP17.59■□□□□ 0.41
HMGN4-201ENST00000377575 KCNV2Q8TDN2 545 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 GAB3Q8WWW8 586 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 SHC3Q92529 594 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 EDEM1Q92611 657 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 ST7Q9NRC1 585 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 EBF1Q9UH73 591 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 GPR179Q6PRD1 2367 aa17.59■□□□□ 0.41
HMGN4-201ENST00000377575 PES1O00541 588 aaKnown RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 AXIN1O15169 862 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 KLF8O95600 359 aaPredicted RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 LTFP02788 710 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 KLKB1P03952 638 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 CYBBP04839 570 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 TIE1P35590 1138 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 GPD2P43304 727 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 DGKEP52429 567 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 SRSF5Q13243 272 aaKnown RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 TRIP4Q15650 581 aaPredicted RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 LPAL2Q16609 132 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 MIIPQ5JXC2 388 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 EOGTQ5NDL2 527 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 C10orf76Q5T2E6 689 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 MSANTD2Q6P1R3 559 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 DENND1CQ8IV53 801 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 SFTPA1Q8IWL2 248 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 CPXM2Q8N436 756 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 CCDC33Q8N5R6 958 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 ALLCQ8N6M5 410 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 TXNDC5Q8NBS9 432 aaKnown RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 ZNF606Q8WXB4 792 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 TRIM62Q9BVG3 475 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 POLR3BQ9NW08 1133 aaPredicted RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 AGO1Q9UL18 857 aaKnown RBP17.58■□□□□ 0.4
HMGN4-201ENST00000377575 NFE2L3Q9Y4A8 694 aa17.58■□□□□ 0.4
HMGN4-201ENST00000377575 BECN2A8MW95 431 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 ALDH1A2O94788 518 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 HOXC13P31276 330 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 KIR2DL1P43626 348 aaPredicted RBP17.57■□□□□ 0.4
HMGN4-201ENST00000377575 RPL34P49207 117 aaKnown RBP17.57■□□□□ 0.4
HMGN4-201ENST00000377575 DGKGP49619 791 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 ZNF445P59923 1031 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 APBA1Q02410 837 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 CRY1Q16526 586 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 DENND1BQ6P3S1 775 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 SASS6Q6UVJ0 657 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 KIAA2013Q8IYS2 634 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 DCLK2Q8N568 766 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 ZNF513Q8N8E2 541 aaPredicted RBP17.57■□□□□ 0.4
HMGN4-201ENST00000377575 IL17RCQ8NAC3 791 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 ENOX1Q8TC92 643 aaKnown RBP17.57■□□□□ 0.4
HMGN4-201ENST00000377575 CLEC4CQ8WTT0 213 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 STK32AQ8WU08 396 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 BHMTQ93088 406 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 MIS12Q9H081 205 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 SIX2Q9NPC8 291 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 SFMBT1Q9UHJ3 866 aa17.57■□□□□ 0.4
HMGN4-201ENST00000377575 GABBR2O75899 941 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 LATS1O95835 1130 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 PENKP01210 267 aaPredicted RBP17.56■□□□□ 0.4
HMGN4-201ENST00000377575 RETP07949 1114 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 TPM2P07951 284 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 CHRM1P11229 460 aaPredicted RBP17.56■□□□□ 0.4
HMGN4-201ENST00000377575 PTK2Q05397 1052 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 CACNA2D4Q7Z3S7 1137 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 FAM217AQ8IXS0 508 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 FAM149B1Q96BN6 582 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 POLMQ9NP87 494 aaPredicted RBP17.56■□□□□ 0.4
HMGN4-201ENST00000377575 SAMSN1Q9NSI8 373 aaKnown RBP17.56■□□□□ 0.4
HMGN4-201ENST00000377575 ANO10Q9NW15 660 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 PLK2Q9NYY3 685 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 DNAJC12Q9UKB3 198 aa17.56■□□□□ 0.4
HMGN4-201ENST00000377575 PLXND1Q9Y4D7 1925 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 MSI1O43347 362 aaKnown RBP17.55■□□□□ 0.4
HMGN4-201ENST00000377575 LRP3O75074 770 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 NCAM1P13591 858 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 PDCLQ13371 301 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 STX1AQ16623 288 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 FYB2Q5VWT5 728 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 NUGGCQ68CJ6 796 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 ANO7Q6IWH7 933 aa17.55■□□□□ 0.4
HMGN4-201ENST00000377575 NOX5Q96PH1 765 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms