RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 TRIP10Q15642 601 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 PKN2Q16513 984 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 CYP51A1Q16850 503 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 GJB7Q6PEY0 223 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 UNC93AQ86WB7 457 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 MAGEC3Q8TD91 643 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 SNCAIPQ9Y6H5 919 aa11.41□□□□□ -0.58
PHACTR4-202ENST00000373839 FRMPD4Q14CM0 1322 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 DIP2BQ9P265 1576 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 ADCY6O43306 1168 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 RRM1P23921 792 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 PTGISQ16647 500 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 RIN3Q8TB24 985 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 MCOLN3Q8TDD5 553 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CYGBQ8WWM9 190 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CDCA5Q96FF9 252 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 IARS2Q9NSE4 1012 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CEP170BQ9Y4F5 1589 aaPredicted RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 TNS2Q63HR2 1409 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 A0A087X0T9 212 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 SEC24DO94855 1032 aaPredicted RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 FAM228BP0C875 321 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CCND1P24385 295 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CLK1P49759 484 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 SCNN1BP51168 640 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 SLC29A2Q14542 456 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 RIOX2Q8IUF8 465 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CCDC60Q8IWA6 550 aaPredicted RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 TMEM199Q8N511 208 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 OSGEPL1Q9H4B0 414 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 ACTR8Q9H981 624 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 ENOPH1Q9UHY7 261 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 FAM50BQ9Y247 325 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 MYPNQ86TC9 1320 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 RAD51BO15315 384 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CYTH3O43739 400 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 GHRP10912 638 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 FCGR1AP12314 374 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CD151P48509 253 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CENPAP49450 140 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 PEX5P50542 639 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 SEL1L3Q68CR1 1132 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 STK40Q8N2I9 435 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 FBXL16Q8N461 479 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 SGF29Q96ES7 293 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 P2RX7Q99572 595 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 EXOSC4Q9NPD3 245 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 ARHGAP23Q9P227 1491 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 SETD1BQ9UPS6 1966 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 NRCAMQ92823 1304 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 GUCY1B2O75343 617 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 MTA2O94776 668 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CYP3A4P08684 503 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 CYP2F1P24903 491 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 TKTP29401 623 aaKnown RBP11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 WDR48Q8TAF3 677 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 TMEM134Q9H6X4 195 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 TSPAN16Q9UKR8 245 aa11.4□□□□□ -0.58
PHACTR4-202ENST00000373839 PCYT1AP49585 367 aa11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 PSEN1P49768 467 aa11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 CDK20Q8IZL9 346 aa11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 VPS33AQ96AX1 596 aa11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 KLF6Q99612 283 aaPredicted RBP11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 HPSEQ9Y251 543 aa11.4□□□□□ -0.59
PHACTR4-202ENST00000373839 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 NWD1Q149M9 1564 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 GNG14A0A1W2PPG7 69 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 PDZK1P1A8MUH7 402 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 HMGCRP04035 888 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 LPCAT1Q8NF37 534 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF558Q96NG5 402 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ASB2Q96Q27 587 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 FAM118BQ9BPY3 351 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 OSBPL10Q9BXB5 764 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 MIEF1Q9NQG6 463 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 SEPT3Q9UH03 358 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 VANGL2Q9ULK5 521 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 MAPRE3Q9UPY8 281 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 PPRC1Q5VV67 1664 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 TM9SF1O15321 606 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 CYP1A1P04798 512 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 GTF2E2P29084 291 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 PURAQ00577 322 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ATP6AP1LQ52LC2 224 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF655Q8N720 491 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 HTATIP2Q9BUP3 242 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 CELF4Q9BZC1 486 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 RAD21L1Q9H4I0 556 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 AVENQ9NQS1 362 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 BATF3Q9NR55 127 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 RGS18Q9NS28 235 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms