RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 IL31Q6EBC2 164 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TBC1D1Q86TI0 1168 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 FAM131BQ86XD5 332 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 PSTKQ8IV42 348 aaKnown RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ATG4AQ8WYN0 398 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ELAC2Q9BQ52 826 aaKnown RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 RCOR3Q9P2K3 495 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 CHMP2BQ9UQN3 213 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ERI2A8K979 691 aaKnown RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ATP9BO43861 1147 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 TRUB2O95900 331 aaKnown RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 SELPP16109 830 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 HADHAP40939 763 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 CACNB2Q08289 660 aaPredicted RBP12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ADCY1Q08828 1119 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 CUL3Q13618 768 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 ATP6V1E2Q96A05 226 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 RMDN1Q96DB5 314 aa12.56□□□□□ -0.4
SMAD9-201ENST00000350148 SP2Q02086 613 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 BBS12Q6ZW61 710 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ACAD11Q709F0 780 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 CEP70Q8NHQ1 597 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 IRGQQ8WZA9 623 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 XPO6Q96QU8 1125 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 GPR25O00155 361 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 PQBP1O60828 265 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 HTR7P34969 479 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 TBX4P57082 545 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 FAM133BQ5BKY9 247 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 STRADAQ7RTN6 431 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 FBXO25Q8TCJ0 367 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 APOBEC2Q9Y235 224 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 EOMESO95936 686 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 RAG1P15918 1043 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 CD52P31358 61 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 RENBPP51606 427 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 FAM183BPQ6ZVS7 135 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 SLC24A5Q71RS6 500 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 RPRD1AQ96P16 312 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 MUC3BQ9H195 1237 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 EML4Q9HC35 981 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 CCDC22O60826 627 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 CCDC130P13994 396 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 MON1BQ7L1V2 547 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 KLHL29Q96CT2 875 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 PABPC5Q96DU9 382 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ASIC4Q96FT7 647 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 PHACTR1Q9C0D0 580 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 SLX4Q8IY92 1834 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 IGKV6D-21A0A0A0MT36 114 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 TREHO43280 583 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 SKAP2O75563 359 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 STAU1O95793 577 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ITGAVP06756 1048 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 LONRF1Q17RB8 773 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 YAF2Q8IY57 180 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 EMILIN2Q9BXX0 1053 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
SMAD9-201ENST00000350148 MRPL40Q9NQ50 206 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 NOP53Q9NZM5 478 aaKnown RBP12.55□□□□□ -0.4
SMAD9-201ENST00000350148 ASGR1P07306 291 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 WARSP23381 471 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ST8SIA6P61647 398 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 NLRP9Q7RTR0 991 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 LRRC6Q86X45 466 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 TMEM199Q8N511 208 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SNX2O60749 519 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SERPINI2O75830 405 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 GJB1P08034 283 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 HMBSP08397 361 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SCNN1AP37088 669 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 NPY2RP49146 381 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 XRCC4Q13426 336 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 KCNA10Q16322 511 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 ARHGAP17Q68EM7 881 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 B3GNT9Q6UX72 402 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SCUBE3Q8IX30 993 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 PTPRN2Q92932 1015 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SERPINI1Q99574 410 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 TSEN34Q9BSV6 310 aaKnown RBP12.54□□□□□ -0.4
SMAD9-201ENST00000350148 UBR3Q6ZT12 1888 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 SLC12A8A0AV02 714 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 O00370 1275 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 F2P00734 622 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 COL6A1P12109 1028 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 PPM1AP35813 382 aa12.54□□□□□ -0.4
SMAD9-201ENST00000350148 CRHR2Q13324 411 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms