RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 HTR3CQ8WXA8 447 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 SYNCRIPO60506 623 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ASGR1P07306 291 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 KCNA10Q16322 511 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 TEDDM1Q5T9Z0 273 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 TMA16Q96EY4 203 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 TLR10Q9BXR5 811 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 NXF3Q9H4D5 531 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 NPHS2Q9NP85 383 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ACP6Q9NPH0 428 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 RBPJLQ9UBG7 517 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 MARCOQ9UEW3 520 aaPredicted RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 F8VP50 259 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 CA12O43570 354 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 E2F6O75461 281 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ALDH18A1P54886 795 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 USP41Q3LFD5 358 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 HIPK3Q9H422 1215 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 VPS26AO75436 327 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ATP5C1P36542 298 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 KRT80Q6KB66 452 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 E2F7Q96AV8 911 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 UBP1Q9NZI7 540 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 TRHDEQ9UKU6 1024 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 SMPD1P17405 629 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ILDR2Q71H61 639 aa20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.18■□□□□ 0.82
SEMA6C-201ENST00000341697 ANGPT2O15123 496 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 AARSP49588 968 aaKnown RBP eCLIP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 IARS2Q9NSE4 1012 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 PCDHA2Q9Y5H9 948 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 CICQ96RK0 1608 aaPredicted RBP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 CHUKO15111 745 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 SEPT4O43236 478 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 ARL4DP49703 201 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 FOXD4Q12950 439 aaPredicted RBP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 MAMLD1Q13495 774 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 PIGZQ86VD9 579 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 ANKRD7Q92527 254 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 TTC36A6NLP5 189 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 TREHO43280 583 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 CUL3Q13618 768 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 SLC51AQ86UW1 340 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 KATNAL2Q8IYT4 538 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 MTBPQ96DY7 904 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 ASPSCR1Q9BZE9 553 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.17■□□□□ 0.823e-8■■■■■ 46.9
SEMA6C-201ENST00000341697 SHOC2Q9UQ13 582 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 EIF3HO15372 352 aaKnown RBP eCLIP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 CSE1LP55060 971 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 SH3D19Q5HYK7 790 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 TSHZ1Q6ZSZ6 1077 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 FAM161BQ96MY7 647 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 HTATIP2Q9BUP3 242 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 SPATA16Q9BXB7 569 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 DHX33Q9H6R0 707 aaKnown RBP20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 ECT2Q9H8V3 914 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 PRDM16Q9HAZ2 1276 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 TAS2R14Q9NYV8 317 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 MSRAQ9UJ68 235 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 NUDT5Q9UKK9 219 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 VANGL2Q9ULK5 521 aa20.17■□□□□ 0.82
SEMA6C-201ENST00000341697 HACD1B0YJ81 288 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 EFL1Q7Z2Z2 1120 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 TOP6BLQ8N6T0 577 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 ARMC2Q8NEN0 867 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CCDC138Q96M89 665 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CDC42EP4Q9H3Q1 356 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 DMGDHQ9UI17 866 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 MAGEB16A2A368 324 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CALCAP01258 141 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 HNRNPH2P55795 449 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 PTCH2Q9Y6C5 1203 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CDY1Q9Y6F8 540 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 UNCXA6NJT0 531 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 GLRA3O75311 464 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CYP2C18P33260 490 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 ARL2P36404 184 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 SERPINB8P50452 374 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 MARSP56192 900 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CLPBQ9H078 707 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 MANSC1Q9H8J5 431 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 MRGBPQ9NV56 204 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 EPHB6O15197 1021 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 TRUB2O95900 331 aaKnown RBP20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 RARAP10276 462 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 SELPP16109 830 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 CTNNB1P35222 781 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 PPM1AP35813 382 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 TUSC3Q13454 348 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 NECAB2Q7Z6G3 386 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 MYLPFQ96A32 169 aa20.16■□□□□ 0.82
SEMA6C-201ENST00000341697 B4GALT4O60513 344 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 CYP1A2P05177 515 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 CDH17Q12864 832 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 FAM183BPQ6ZVS7 135 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 IGFLR1Q9H665 355 aa20.15■□□□□ 0.82
SEMA6C-201ENST00000341697 DCDC2Q9UHG0 476 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms