RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TMCO5AQ8N6Q1 288 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 PHC3Q8NDX5 983 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 FAM151AQ8WW52 585 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 ANKRD36BP1Q96IX9 119 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 HERPUD2Q9BSE4 406 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 FOXP3Q9BZS1 431 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 MTMR12Q9C0I1 747 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 DRC3Q9H069 523 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 WDR55Q9H6Y2 383 aaPredicted RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 PCDH9Q9HC56 1237 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 DDX56Q9NY93 547 aaKnown RBP7.77□□□□□ -1.17
CDHR3-201ENST00000317716 UBP1Q9NZI7 540 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 SHOC2Q9UQ13 582 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 SSX2IPQ9Y2D8 614 aa7.77□□□□□ -1.17
CDHR3-201ENST00000317716 A0A0B4J269 797 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 UGT1A9O60656 530 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TNFAIP8O95379 198 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ABCD1P33897 745 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CDH8P55286 799 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SPDYAQ5MJ70 313 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 OTUD3Q5T2D3 398 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NET1Q7Z628 596 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CASP10Q92851 521 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SDCCAG3Q96C92 435 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SERAC1Q96JX3 654 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 UGT1A7Q9HAW7 530 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 UGT1A10Q9HAW8 530 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 UGT1A8Q9HAW9 530 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ASNSD1Q9NWL6 643 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SLC17A6Q9P2U8 582 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NR2E3Q9Y5X4 410 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 RPS6KL1Q9Y6S9 549 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 GOLGA4Q13439 2230 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SYCE1LA8MT33 242 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 APOL1O14791 398 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 LSM1O15116 133 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SORBS2O94875 1100 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ASNSP08243 561 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CFHP08603 1231 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 RPS12P25398 132 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 EPHA3P29320 983 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SDC4P31431 198 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 HOXD13P35453 343 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CDH15P55291 814 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 PPP4CP60510 307 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 POU5F1Q01860 360 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NME3Q13232 169 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 PTK2BQ14289 1009 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 FUT11Q495W5 492 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 PAOXQ6QHF9 649 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CCDC81Q6ZN84 652 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 OTOP1Q7RTM1 612 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 APOBEC3FQ8IUX4 373 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ZBTB8OSQ8IWT0 167 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 DDIASQ8IXT1 998 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 FAM71AQ8IYT1 594 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 STKLD1Q8NE28 680 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NRG4Q8WWG1 115 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ZNF606Q8WXB4 792 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 DGCR14Q96DF8 476 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CDCA5Q96FF9 252 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 PANX3Q96QZ0 392 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 S100A14Q9HCY8 104 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 KCNMB3Q9NPA1 279 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NDUFA13Q9P0J0 144 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 MEIS2O14770 477 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TBX3O15119 743 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TM7SF2O76062 418 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ALADP13716 330 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ZFXP17010 805 aaPredicted RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 PLK1P53350 603 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 GDF10P55107 478 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 LSM3P62310 102 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ACVR2BQ13705 512 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 USP10Q14694 798 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 GSTA3Q16772 222 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 SPDYE2Q495Y8 402 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NADK2Q4G0N4 442 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 GPR107Q5VW38 600 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TXNRD3NBQ6F5E7 133 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ANKRD23Q86SG2 305 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TREML1Q86YW5 311 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TSPAN14Q8NG11 270 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 DCUN1D1Q96GG9 259 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 WDR18Q9BV38 432 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TMEM109Q9BVC6 243 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 CYP26B1Q9NR63 512 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 TRNAU1APQ9NX07 287 aaKnown RBP7.76□□□□□ -1.17
CDHR3-201ENST00000317716 ATP11BQ9Y2G3 1177 aa7.76□□□□□ -1.17
CDHR3-201ENST00000317716 NUP188Q5SRE5 1749 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 TCRBV7S3A2A0A539 114 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 TTLL13PA6NNM8 815 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 H3BSA7 217 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 M0R2N6 131 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 E2F6O75461 281 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 CYP1A2P05177 515 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 T-ENOLP0DO92 83 aa7.75□□□□□ -1.17
CDHR3-201ENST00000317716 HSPA8P11142 646 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms