RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SULT1E1P49888 294 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 TSTA3Q13630 321 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 SRPK1Q96SB4 655 aaKnown RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 CROTQ9UKG9 612 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 MON2Q7Z3U7 1717 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 C1orf232A0A0U1RR37 186 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 RARAP10276 462 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 ZNF572Q7Z3I7 529 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 DHRSXQ8N5I4 330 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 SPATA20Q8TB22 786 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 AFG1LQ8WV93 481 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 FAM118BQ9BPY3 351 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 COMMD8Q9NX08 183 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 ZMYM2Q9UBW7 1377 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 C3P01024 1663 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 OPLAHO14841 1288 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 BIRC5O15392 142 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 VIL1P09327 827 aaKnown RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 RPS6KA3P51812 740 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 FCGRTP55899 365 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 PSMC6P62333 389 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 MMRN1Q13201 1228 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 C6orf10Q5SRN2 563 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 SPATA2LQ8IUW3 424 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 KATNAL2Q8IYT4 538 aa18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 INPP4AQ96PE3 977 aaPredicted RBP18.01■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC4A1P02730 911 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 C6orf222P0C671 652 aaPredicted RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 ST13P50502 369 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 ATXN7L3BQ96GX2 97 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 ASB2Q96Q27 587 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 ADAM33Q9BZ11 813 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 SIGLEC1Q9BZZ2 1709 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 HUNKP57058 714 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 WDR59Q6PJI9 974 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 CEP44Q9C0F1 390 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 SLIT3O75094 1523 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 C5orf60A6NFR6 353 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 ZBTB39O15060 712 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 JAK1P23458 1154 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 PCSK1P29120 753 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 IL12RB1P42701 662 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 ZNF484Q5JVG2 852 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 ATF7IP2Q5U623 682 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 IFNEQ86WN2 208 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 RASGEF1CQ8N431 466 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 PDPRQ8NCN5 879 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 GPRC5CQ9NQ84 441 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 NMRK1Q9NWW6 199 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 SYNPO2Q9UMS6 1093 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 F5H423 210 aaPredicted RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 RPL26P61254 145 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 NME3Q13232 169 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 ACAP1Q15027 740 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 TLK2Q86UE8 772 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 KRT73Q86Y46 540 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 DCP1BQ8IZD4 617 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 MTMR9Q96QG7 549 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 GRIP2Q9C0E4 1043 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 WDR12Q9GZL7 423 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 CNOT3O75175 753 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC26A2P50443 739 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 FAM98BQ52LJ0 330 aaKnown RBP18■□□□□ 0.47
PCDHA13-201ENST00000289272 DENND1BQ6P3S1 775 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 OLFML1Q6UWY5 402 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 PPP1R36Q96LQ0 422 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC25A23Q9BV35 468 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
PCDHA13-201ENST00000289272 LDLRP01130 860 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 SERPINA6P08185 405 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 BACE1P56817 501 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 TUBA4AP68366 448 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 DPYSQ14117 519 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 ARHGEF19Q8IW93 802 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 VPS37AQ8NEZ2 397 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 ETNPPLQ8TBG4 499 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 HES6Q96HZ4 224 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 SLC4A9Q96Q91 983 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 RMND5AQ9H871 391 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 EIF3LQ9Y262 564 aaKnown RBP17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 MYO1GB0I1T2 1018 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 UBDO15205 165 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 MAGEC1O60732 1142 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 LCP1P13796 627 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 ZNF846Q147U1 533 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 RRM2BQ7LG56 351 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 ACMSDQ8TDX5 336 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 KLHL3Q9UH77 587 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 DDX3XO00571 662 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 TRIM13O60858 407 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 NPTX2P47972 431 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 EURLQ9NYK6 297 aa17.99■□□□□ 0.47
PCDHA13-201ENST00000289272 SNX9Q9Y5X1 595 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms