RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ripk3Q9QZL0 486 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Dlc1Q9R0Z9 1092 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Acp4D3YTS9 425 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm6205E9PZS2 359 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Prom1O54990 867 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Adam15O88839 864 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 ItgalP24063 1163 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Asgr1P34927 284 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 DmpkP54265 631 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 PrkcqQ02111 707 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ccdc127Q3TC33 260 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Lrrn4clQ3TYX2 239 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mks1Q5SW45 561 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 ProcrQ64695 242 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Sp140Q6NSQ5 534 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mrgprb8Q7TN51 330 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 WtipQ7TQJ8 398 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 TdrpQ8C5P7 182 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm6367Q8C6L9 287 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 AA792892Q8C6S1 278 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Sorcs3Q8VI51 1219 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 FdpsQ920E5 353 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pcyox1Q9CQF9 505 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Psmd8Q9CX56 353 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mms19Q9D071 1031 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Dnajc12Q9R022 198 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 TfebQ9R210 475 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 GghQ9Z0L8 317 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 1700031M16RikA0A087WSH0 82 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 4931406B18RikA2RSL7 367 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 PiggD3Z3Y1 983 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ccdc85cE9Q6B2 420 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Atf6F6VAN0 656 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Nedd9O35177 833 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Prkg1P0C605 671 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gnat1P20612 350 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gjb1P28230 283 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Scg3P47867 471 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Rpl10aP53026 217 aaKnown RBP13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Thumpd3P97770 505 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Olfr533Q7TRT7 320 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gsto2Q8K2Q2 248 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Sytl1Q99N80 567 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Lpin3Q99PI4 848 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Atg7Q9D906 698 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Limd1Q9QXD8 668 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 NumbQ9QZS3 653 aa13.33□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cntnap5aQ0V8T9 1304 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Olfr600E9PUN7 314 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Top6blJ3QMY9 579 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gm3187M0QWW3 260 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 LgmnO89017 435 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 PfkmP47857 780 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 EdnrbP48302 442 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 MipP51180 263 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 RalgdsQ03385 852 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gpsm3Q3U1Z5 159 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gpd1lQ3ULJ0 351 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Rap1gap2Q5SVL6 712 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gata6Q61169 589 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gemin4Q6P6L6 1058 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Echs1Q8BH95 290 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Anapc5Q8BTZ4 740 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Trim14Q8BVW3 440 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Colgalt1Q8K297 617 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Clptm1Q8VBZ3 664 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Olfr784Q8VFZ9 319 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ppp1r16bQ8VHQ3 568 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Glra3Q91XP5 464 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 NonoQ99K48 473 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Dcp2Q9CYC6 422 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ndc80Q9D0F1 642 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 TtpalQ9D3D0 343 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Actrt2Q9D9L5 377 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Spata9Q9D9R3 252 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Tubb3Q9ERD7 450 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ndufa13Q9ERS2 144 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Olfr391-psA0A0U1RNJ4 312 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Klhl41A2AUC9 606 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Pdzd7E9Q9W7 1021 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cops5O35864 334 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Magea1O89006 320 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Fcer2P20693 331 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Psma2P49722 234 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Neurog2P70447 263 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Gcnt3Q5JCT0 437 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Slc26a2Q62273 739 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Ddx55Q6ZPL9 600 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cdkn3Q810P3 211 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Bmt2Q8BXK4 403 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Q8CIL4 281 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Fam49bQ921M7 324 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Cldn22Q9D7U6 220 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Stap1Q9JM90 297 aaKnown RBP13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Magea2Q9R2A2 320 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 Mtm1Q9Z2C5 603 aa13.32□□□□□ -0.28
Nup88-203ENSMUST00000108531 SisF8VQM5 1818 aa13.31□□□□□ -0.28
Nup88-203ENSMUST00000108531 Brca1P48754 1812 aa13.31□□□□□ -0.28
Nup88-203ENSMUST00000108531 PotegA5H0M4 473 aa13.31□□□□□ -0.28
Nup88-203ENSMUST00000108531 Olfr67F8VPJ8 320 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms