RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 EME2A4GXA9 379 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 A6NHS1 94 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 B2RBV5 119 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TM9SF1O15321 606 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 MSCO60682 206 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 SP100P23497 879 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 MGAT5Q09328 741 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TRIM32Q13049 653 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 SIX1Q15475 284 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 EEF1DP3Q658K8 133 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ATG16L1Q676U5 607 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 CWF19L1Q69YN2 538 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 C4orf50Q6ZRC1 276 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF784Q8NCA9 323 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 LMO3Q8TAP4 145 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 DNAJB3Q8WWF6 145 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 CPB2Q96IY4 423 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ACO2Q99798 780 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ADPGKQ9BRR6 497 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 GCOM2Q9BZD3 368 aaPredicted RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 MINDY3Q9H8M7 445 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 PCDH12Q9NPG4 1184 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 RNF186Q9NXI6 227 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 SHOC2Q9UQ13 582 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 H3BRJ5 948 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 OGTO15294 1046 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 DUSP11O75319 330 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT36O76013 467 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 PSMG1O95456 288 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 EDN1P05305 212 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ENO1P06733 434 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 ERFP50548 548 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 IRX4P78413 519 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TRPC3Q13507 836 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 SLC1A5Q15758 541 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 NBPF20Q3BBV1 942 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 MPZL3Q6UWV2 235 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 KATNAL2Q8IYT4 538 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 KIAA0319LQ8IZA0 1049 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TTC13Q8NBP0 860 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TCP10LQ8TDR4 215 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 MFSD14AQ96MC6 490 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 PAFAH2Q99487 392 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM120AQ9BXJ8 343 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 RPF1Q9H9Y2 349 aaKnown RBP7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 DNPEPQ9ULA0 475 aa7.26□□□□□ -1.25
SRGAP3-213ENST00000618999 DNAJC6O75061 913 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 F2P00734 622 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CALB1P05937 261 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT19P08727 400 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM191BP0C7N4 346 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ZSCAN5DPP0CG00 497 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 C7P10643 843 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 DESP17661 470 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 SERPINB3P29508 390 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TNFSF9P41273 254 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CPA2P48052 419 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 GPC3P51654 580 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF200P98182 395 aaPredicted RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 PROX2Q3B8N5 592 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 EGFLAMQ63HQ2 1017 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 FEZF2Q8TBJ5 459 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 C10orf82Q8WW14 230 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 FBXL18Q96ME1 805 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 OLFM3Q96PB7 478 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TRAPPC9Q96Q05 1148 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 OSMRQ99650 979 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF184Q99676 751 aaPredicted RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 WWP1Q9H0M0 922 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 XPNPEP3Q9NQH7 507 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 DDX56Q9NY93 547 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 COL1A2P08123 1366 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TRPM7Q96QT4 1865 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 C17orf102A2RUQ5 167 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 MCF2LO15068 1137 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TREHO43280 583 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ZC3H11AO75152 810 aaKnown RBP eCLIP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 KRT37O76014 449 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 GNAZP19086 355 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 DNAJB2P25686 324 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 GTF2H1P32780 548 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 GCNT1Q02742 428 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 KDSRQ06136 332 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 PSMD6Q15008 389 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 SGSM1Q2NKQ1 1148 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 DNAL1Q4LDG9 190 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 KHDC1Q4VXA5 237 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CGB2Q6NT52 195 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TDRPQ86YL5 185 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CRLF3Q8IUI8 442 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 PPIL6Q8IXY8 311 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ENDOVQ8N8Q3 282 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TTC16Q8NEE8 873 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 DTNBP1Q96EV8 351 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 HAPLN2Q9GZV7 340 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 FZD8Q9H461 694 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF212Q9UDV6 495 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 A0A1W2PPM1 405 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 A8MXQ7 604 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms