RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NCOA4Q13772 614 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ZSCAN26Q16670 478 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 CCDC181Q5TID7 509 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 EMBQ6PCB8 327 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 C4orf50Q6ZRC1 276 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ASCL5Q7RTU5 278 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 YAF2Q8IY57 180 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 CMTM8Q8IZV2 173 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 SPATA4Q8NEY3 305 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 CLDN23Q96B33 292 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 TRMT2BQ96GJ1 504 aaKnown RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 MYRFLQ96LU7 910 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 BCO2Q9BYV7 579 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 SNX25Q9H3E2 840 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 SMYD3Q9H7B4 428 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 VRTNQ9H8Y1 702 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 OBP2AQ9NY56 170 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 NDRG2Q9UN36 371 aaKnown RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 CCL26Q9Y258 94 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 CACNA1IQ9P0X4 2223 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ANAPC1Q9H1A4 1944 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 MAN2B1O00754 1011 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ZNF185O15231 689 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 GFRA3O60609 400 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 PTPN1P18031 435 aaKnown RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 RAP1GAPP47736 663 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 C2orf54Q08AI8 447 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 MAPRE1Q15691 268 aaKnown RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 ASIC2Q16515 512 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ZNF699Q32M78 642 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 TDRD12Q587J7 1177 aaKnown RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 SCARA5Q6ZMJ2 495 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ENOSF1Q7L5Y1 443 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 FMNL3Q8IVF7 1028 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 TTC8Q8TAM2 541 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 RIN3Q8TB24 985 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 MYCBPAPQ8TBZ2 947 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 BPIFB1Q8TDL5 484 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
TPM1-212ENST00000558347 CAVIN3Q969G5 261 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 NT5C1BQ96P26 610 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 SELENOOQ9BVL4 669 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 STK33Q9BYT3 514 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 NLRC4Q9NPP4 1024 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 GTSE1Q9NYZ3 720 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 DNAJC12Q9UKB3 198 aa10.84□□□□□ -0.67
TPM1-212ENST00000558347 ZNF638Q14966 1978 aaKnown RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 A8MXQ7 604 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 TULP2O00295 520 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 RNF40O75150 1001 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 SYF2O95926 243 aaKnown RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 SP9P0CG40 484 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM1-212ENST00000558347 AVPR1AP37288 418 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 GRIK1P39086 918 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 PIK3CAP42336 1068 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 CACNA2D1P54289 1103 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 USP46P62068 366 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 GCNT1Q02742 428 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 TNK2Q07912 1038 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 IFI16Q16666 785 aaKnown RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 ZNF667Q5HYK9 610 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 ALS2CLQ60I27 953 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 TXNDC11Q6PKC3 985 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 VSTM1Q6UX27 236 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 MON1AQ86VX9 555 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 CELF5Q8N6W0 485 aaKnown RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 B3GALNT2Q8NCR0 500 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 CSGALNACT1Q8TDX6 532 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 FAM3CQ92520 227 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 MRPS31Q92665 395 aaKnown RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 TAF4BQ92750 862 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 FAXDC2Q96IV6 333 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 SPATA17Q96L03 361 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 SLC22A12Q96S37 553 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 NELL2Q99435 816 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 TLR10Q9BXR5 811 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 SDCBP2Q9H190 292 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 TRPC7Q9HCX4 862 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 SPATA6Q9NWH7 488 aaPredicted RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 STIM2Q9P246 746 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 UXTQ9UBK9 157 aaPredicted RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 ZMYM5Q9UJ78 669 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 MRPS17Q9Y2R5 130 aaKnown RBP10.83□□□□□ -0.68
TPM1-212ENST00000558347 R4GN57 208 aa10.83□□□□□ -0.68
TPM1-212ENST00000558347 F5P12259 2224 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 C2orf78A6NCI8 922 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 PRR23AA6NEV1 266 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 A6NNZ2 444 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 GOLGA8KD6RF30 607 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 F8VP50 259 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 CLDN5O00501 218 aa10.82□□□□□ -0.68
TPM1-212ENST00000558347 NCAM2O15394 837 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms