RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 TRIM11Q96F44 468 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 RAB6BQ9NRW1 208 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SHOC2Q9UQ13 582 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 CNTN6Q9UQ52 1028 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 TDRKHQ9Y2W6 561 aaKnown RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 HAUS5O94927 633 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 RBL1P28749 1068 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 ALDH18A1P54886 795 aaKnown RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 AMHR2Q16671 573 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 TSNAXIP1Q2TAA8 658 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 XKR3Q5GH77 459 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SLC15A3Q8IY34 581 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 CLEC4CQ8WTT0 213 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SCG3Q8WXD2 468 aaKnown RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 SLC7A3Q8WY07 619 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SKA1Q96BD8 255 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 IFT43Q96FT9 208 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 DHRS4Q9BTZ2 278 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SYNCQ9H7C4 482 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 MAP3K20Q9NYL2 800 aaKnown RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 TMCO1Q9UM00 188 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 BOLA2-SMG1P6H3BVE0 249 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 ABLIM1O14639 778 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 MT-ND3P03897 115 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 HMGCRP04035 888 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 CCNG1P51959 295 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 ARFIP2P53365 341 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 RABGGTBP53611 331 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 CDH6P55285 790 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 BST1Q10588 318 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 PARP6Q2NL67 630 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 VWA5B1Q5TIE3 1220 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 DARS2Q6PI48 645 aaKnown RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 CES3Q6UWW8 571 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 CPB2Q96IY4 423 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 OXCT2Q9BYC2 517 aaPredicted RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 KRT82Q9NSB4 513 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SYNPO2Q9UMS6 1093 aa12.57□□□□□ -0.4
SPTB-206ENST00000553938 SMG5Q9UPR3 1016 aaKnown RBP12.57□□□□□ -0.4
SPTB-206ENST00000553938 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 GYG2O15488 501 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ADCY6O43306 1168 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ITM2AO43736 263 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 APRTP07741 180 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ARRB2P32121 409 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 SKIV2L2P42285 1042 aaKnown RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 BACE1P56817 501 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 FAM102AQ5T9C2 384 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 TP53INP2Q8IXH6 220 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 TMEM35BQ8NCS4 154 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 RBM15BQ8NDT2 890 aaKnown RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ZBED3Q96IU2 234 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 TRAPPC9Q96Q05 1148 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 RAB3IPQ96QF0 476 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 NIF3L1Q9GZT8 377 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 INIPQ9NRY2 104 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 COL2A1P02458 1487 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 SCN1AP35498 2009 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 DCTN3O75935 186 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 TCF7P36402 384 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 APLP1P51693 650 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 GHRHRQ02643 423 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 USP37Q86T82 979 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ZNF358Q9NW07 568 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 MAFBQ9Y5Q3 323 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 KCNN4O15554 427 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 SLC45A4Q5BKX6 768 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 PPP6R3Q5H9R7 873 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 FAM83AQ86UY5 434 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 CAND1Q86VP6 1230 aaKnown RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 BRSK2Q8IWQ3 736 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 SMYD1Q8NB12 490 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 BBOF1Q8ND07 529 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 AGR3Q8TD06 166 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ATXN7L3BQ96GX2 97 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ZNF778Q96MU6 729 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 NR1H4Q96RI1 486 aaPredicted RBP12.56□□□□□ -0.4
SPTB-206ENST00000553938 PPM1HQ9ULR3 514 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
SPTB-206ENST00000553938 ANK1P16157 1881 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 ZBTB42B2RXF5 422 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 H7C0C1 242 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 INO80B-WBP1J3KQ70 363 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 M0QYV0 167 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 PPEF2O14830 753 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 ITGB3P05106 788 aa12.55□□□□□ -0.4
SPTB-206ENST00000553938 PTPRAP18433 802 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms