RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 TTC31Q49AM3 519 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-203ENST00000552875 SEZ6Q53EL9 994 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 CREB3L3Q68CJ9 461 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 DENND5BQ6ZUT9 1274 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 CLEC14AQ86T13 490 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 CACUL1Q86Y37 369 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 CD302Q8IX05 232 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 SPATA17Q96L03 361 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 SLITRK1Q96PX8 696 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 ACBD6Q9BR61 282 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 LHX5Q9H2C1 402 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
PRKCH-203ENST00000552875 KMT5AQ9NQR1 393 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 TMLHEQ9NVH6 421 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
PRKCH-203ENST00000552875 KCNG1Q9UIX4 513 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 TUBD1Q9UJT1 453 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 PLAAQ9Y263 795 aa9.28□□□□□ -0.92
PRKCH-203ENST00000552875 UTP20O75691 2785 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 PIRO00625 290 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 ABLIM1O14639 778 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 PPEF2O14830 753 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 TRIM24O15164 1050 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 TNFSF15O95150 251 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 OAS1P00973 400 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 HMGB1P09429 215 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 THEGLP0DJG4 465 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 IFNAR1P17181 557 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 DCTP40126 519 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 NPTX2P47972 431 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 GUCY2FP51841 1108 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 PEX3P56589 373 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 EXOSC10Q01780 885 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 ARID5AQ03989 594 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 ZBTB16Q05516 673 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 MCL1Q07820 350 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 CALCRLQ16602 461 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 ISXQ2M1V0 245 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 SV2CQ496J9 727 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 VSTM1Q6UX27 236 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 C4orf50Q6ZRC1 276 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 TRIM9Q9C026 710 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 CCSER1Q9C0I3 900 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 LSG1Q9H089 658 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 KDM4CQ9H3R0 1056 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 DKK3Q9UBP4 350 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 PTPRJQ12913 1337 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 MYLKQ15746 1914 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 TLN1Q9Y490 2541 aaKnown RBP9.27□□□□□ -0.93
PRKCH-203ENST00000552875 FBN3Q75N90 2809 aa9.27□□□□□ -0.93
PRKCH-203ENST00000552875 POLQO75417 2590 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 A0A1B0GTL3 188 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 A0A1W2PPC4 97 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 A1L4Q6 167 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 LACTBL1A8MY62 500 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 KPNA7A9QM74 516 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 SIGLEC6O43699 453 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 MAGEC1O60732 1142 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 VPS4BO75351 444 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 DDAH2O95865 285 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 DNTTP04053 509 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 EPHX1P07099 455 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 ITGA2BP08514 1039 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 MAGEA11P43364 429 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 CD97P48960 835 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 COPAP53621 1224 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 BNIP3Q12983 259 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 KCNAB2Q13303 367 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 INTS6LQ5JSJ4 861 aaKnown RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 MANEAQ5SRI9 462 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 KIAA0895LQ68EN5 471 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 BORAQ6PGQ7 559 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 ZPBP2Q6X784 338 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 MAMDC2Q7Z304 686 aaPredicted RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 C14orf80Q86SX3 495 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 CATSPER3Q86XQ3 398 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 BBS7Q8IWZ6 715 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 OR2T3Q8NH03 318 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 WDR36Q8NI36 951 aaKnown RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 ERMNQ8TAM6 284 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 MAPK15Q8TD08 544 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 TCEANC2Q96MN5 208 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 SLC6A18Q96N87 628 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 NACA2Q9H009 215 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 FBRSQ9HAH7 460 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 USP29Q9HBJ7 922 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 DDX43Q9NXZ2 648 aaKnown RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 ARHGAP28Q9P2N2 729 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 THAP10Q9P2Z0 257 aaPredicted RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 TPX2Q9ULW0 747 aaKnown RBP9.26□□□□□ -0.93
PRKCH-203ENST00000552875 VPS4AQ9UN37 437 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 NCKAP1Q9Y2A7 1128 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 DERAQ9Y315 318 aa9.26□□□□□ -0.93
PRKCH-203ENST00000552875 DENND4CQ5VZ89 1909 aa9.25□□□□□ -0.93
PRKCH-203ENST00000552875 TLR4O00206 839 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms