RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 STARD13Q9Y3M8 1113 aa11.53□□□□□ -0.56
LINC00661-204ENST00000549354 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
LINC00661-204ENST00000549354 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.53□□□□□ -0.56
LINC00661-204ENST00000549354 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
LINC00661-204ENST00000549354 LOC100653049A0A140TA62 436 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 DCTN3O75935 186 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 KRT34O76011 436 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 LSM8O95777 96 aaKnown RBP11.52□□□□□ -0.56
LINC00661-204ENST00000549354 PYGBP11216 843 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 KRT3P12035 628 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 CTGFP29279 349 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 MAN1A1P33908 653 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 PSEN2P49810 448 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 YARSP54577 528 aaKnown RBP11.52□□□□□ -0.56
LINC00661-204ENST00000549354 CAV1Q03135 178 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 CRHR2Q13324 411 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 HIC1Q14526 733 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 ZNF699Q32M78 642 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 C16orf46Q6P387 395 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 CENPUQ71F23 418 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 IGDCC3Q8IVU1 814 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 POU5F2Q8N7G0 328 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 SPATA18Q8TC71 538 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 CADM1Q9BY67 442 aaKnown RBP11.52□□□□□ -0.56
LINC00661-204ENST00000549354 PLEKHA5Q9HAU0 1116 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 BATF3Q9NR55 127 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 LGALS13Q9UHV8 139 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 XPO7Q9UIA9 1087 aaKnown RBP11.52□□□□□ -0.56
LINC00661-204ENST00000549354 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 DERAQ9Y315 318 aa11.52□□□□□ -0.56
LINC00661-204ENST00000549354 FAM237BA0A1B0GVD1 139 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 CA12O43570 354 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 ZMPSTE24O75844 475 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 NFICP08651 508 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 YWHAEP62258 255 aaKnown RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 C1QBPQ07021 282 aaKnown RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 POLNQ7Z5Q5 900 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 ALYREFQ86V81 257 aaKnown RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 LMNTD2Q8IXW0 634 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 FBXO27Q8NI29 283 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 DENND1AQ8TEH3 1009 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 SPATS2LQ9NUQ6 558 aaKnown RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 NMRK1Q9NWW6 199 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 WASF2Q9Y6W5 498 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 UNC80Q8N2C7 3258 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 M0QYV0 167 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 TJP3O95049 919 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 TROVE2P10155 538 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 MSX2P35548 267 aaPredicted RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 SLC1A1P43005 524 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 RASSF2P50749 326 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 ALDH18A1P54886 795 aaKnown RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 OLIG2Q13516 323 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 SNX30Q5VWJ9 437 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 JADE1Q6IE81 842 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 KDELC2Q7Z4H8 507 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 AGGF1Q8N302 714 aaeCLIP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 SHKBP1Q8TBC3 707 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 CCDC110Q8TBZ0 833 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 SLITRK1Q96PX8 696 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 B3GNT5Q9BYG0 378 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 GCOM2Q9BZD3 368 aaPredicted RBP11.52□□□□□ -0.57
LINC00661-204ENST00000549354 ZNF518BQ9C0D4 1074 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 HES2Q9Y543 173 aa11.52□□□□□ -0.57
LINC00661-204ENST00000549354 ANKRD12Q6UB98 2062 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 GOLGA8TH3BQL2 631 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 KPNA6O60684 536 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 HAUS5O94927 633 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 MT-ND3P03897 115 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 DARSP14868 501 aaKnown RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 AXLP30530 894 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 ELK3P41970 407 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 ACSBG2Q5FVE4 666 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 PLEKHA7Q6IQ23 1121 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 SPOCD1Q6ZMY3 1216 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 SLCO2A1Q92959 643 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 GRAMD1AQ96CP6 724 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 MANSC1Q9H8J5 431 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 MRPL47Q9HD33 250 aaKnown RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 CLUHO75153 1309 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 H3BRJ5 948 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 PPP1R12AO14974 1030 aaPredicted RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 ESRRAP11474 423 aaPredicted RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 GNAT1P11488 350 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 GNAZP19086 355 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 CYP2B6P20813 491 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 GRIA1P42261 906 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 ARFIP2P53365 341 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 EPHB1P54762 984 aa11.51□□□□□ -0.57
LINC00661-204ENST00000549354 EIF3EP60228 445 aaKnown RBP11.51□□□□□ -0.57
LINC00661-204ENST00000549354 FAAP100Q0VG06 881 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms