RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 RFC5P40937 340 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 GNA13Q14344 377 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 GPAT2Q6NUI2 795 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 LRRC34Q8IZ02 419 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 EEF1AKMT1Q8WVE0 214 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ERP44Q9BS26 406 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ELOVL6Q9H5J4 265 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 LY9Q9HBG7 655 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ANAPC2Q9UJX6 822 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TMA7Q9Y2S6 64 aaKnown RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 F8VZ95 297 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TAF4O00268 1085 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 FAM200BP0CF97 657 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ACADLP28330 430 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TGFBR2P37173 567 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ALDH9A1P49189 494 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 C21orf59P57076 290 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 CYP24A1Q07973 514 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 CCDC185Q8N715 623 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 CATSPER2Q96P56 530 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 NUDT14O95848 222 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 GH1P01241 217 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ABCB1P08183 1280 aaPredicted RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 RBP1P09455 135 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TMEM253P0C7T8 217 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 UMPSP11172 480 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 MCAMP43121 646 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 SRP54P61011 504 aaKnown RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 PTSQ03393 145 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 GLB1LQ6UWU2 654 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ZNF605Q86T29 641 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 SPPL2AQ8TCT8 520 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 RORBQ92753 470 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 MAML3Q96JK9 1138 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 AP3D1O14617 1153 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ODC1P11926 461 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 KPNA1P52294 538 aaPredicted RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 RAB2AP61019 212 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 SPP2Q13103 211 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 EMC2Q15006 297 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 SLC22A9Q8IVM8 553 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ATP8B4Q8TF62 1192 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 CENPIQ92674 756 aaPredicted RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TRAPPC9Q96Q05 1148 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 GANQ9H2C0 597 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 WDCPQ9H6R7 721 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ADPRHL2Q9NX46 363 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 DRG1Q9Y295 367 aaKnown RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 DNAJC16Q9Y2G8 782 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 MROH7-TTC4A0A0A0MT08 1334 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 NCAPD2Q15021 1401 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 BTN3A3O00478 584 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ATP9AO75110 1047 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 SRGNP10124 158 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 RBP3P10745 1247 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 S100GP29377 79 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 ATP2C1P98194 919 aaPredicted RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 MTF1Q14872 753 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 LIN54Q6MZP7 749 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TPD52L3Q96J77 140 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 PAIP1Q9H074 479 aaKnown RBP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 CYLDQ9NQC7 956 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 CHST12Q9NRB3 414 aa10.69□□□□□ -0.7
PCDH9-204ENST00000544246 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
PCDH9-204ENST00000544246 TMEM114B3SHH9 223 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 H7C4K7 107 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 PLA2G6O60733 806 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CRTAMO95727 393 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 SLC2A4P14672 509 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 GTF2H1P32780 548 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 RCVRNP35243 200 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 EIF2S3P41091 472 aaKnown RBP10.68□□□□□ -0.7
PCDH9-204ENST00000544246 HIRAP54198 1017 aaPredicted RBP10.68□□□□□ -0.7
PCDH9-204ENST00000544246 ATF7IP2Q5U623 682 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CARNMT1Q8N4J0 409 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 TMEM120AQ9BXJ8 343 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 PIF1Q9H611 641 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CYP4F12Q9HCS2 524 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 GJB4Q9NTQ9 266 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CHORDC1Q9UHD1 332 aaPredicted RBP10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 MAGEB2O15479 319 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 HLA-DQA2P01906 255 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 UCHL3P15374 230 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CNTFP26441 200 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 GSTM5P46439 218 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 CASP4P49662 377 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 OXCT1P55809 520 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 IL2P60568 153 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 TKFCQ3LXA3 575 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 PGBD2Q6P3X8 592 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 SCAIQ8N9R8 606 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 ZFRQ96KR1 1074 aaKnown RBP10.68□□□□□ -0.7
PCDH9-204ENST00000544246 BDH2Q9BUT1 245 aa10.68□□□□□ -0.7
PCDH9-204ENST00000544246 EPB41L4AQ9HCS5 686 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms