RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	KCNJ12	Q14500	433 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	E2F5	Q15329	346 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LY6G5C	Q5SRR4	150 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CDKAL1	Q5VV42	579 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	BTBD8	Q5XKL5	378 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PMF1	Q6P1K2	205 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SYT13	Q7L8C5	426 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	BBS7	Q8IWZ6	715 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CPXM2	Q8N436	756 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TTC8	Q8TAM2	541 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZNF606	Q8WXB4	792 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PNKP	Q96T60	521 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PHOX2B	Q99453	314 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZSWIM1	Q9BR11	485 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CRACR2A	Q9BSW2	395 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	EPC1	Q9H2F5	836 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SIX2	Q9NPC8	291 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PLCB1	Q9NQ66	1216 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RBM12	Q9NTZ6	932 aa	Known RBP	12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	FAM86C1	Q9NVL1	165 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MARCH2	Q9P0N8	246 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PCDHGC3	Q9UN70	934 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZNF292	O60281	2723 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GPR179	Q6PRD1	2367 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	BECN2	A8MW95	431 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TULP2	O00295	520 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CACNG3	O60359	315 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EGF	P01133	1207 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	APOD	P05090	189 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TPM2	P07951	284 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KRT5	P13647	590 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SNX16	P57768	344 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	PTK2	Q05397	1052 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RING1	Q06587	406 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	NNT	Q13423	1086 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TRIP4	Q15650	581 aa	Predicted RBP	12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	STX1A	Q16623	288 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	BSPRY	Q5W0U4	402 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DPY19L2P1	Q6NXN4	242 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TMEM110	Q86TL2	294 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LONP2	Q86WA8	852 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CREBRF	Q8IUR6	639 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FAM217A	Q8IXS0	508 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FAM71A	Q8IYT1	594 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	UBA3	Q8TBC4	463 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RNF139	Q8WU17	664 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SECISBP2L	Q93073	1101 aa	Known RBP	12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	AZIN2	Q96A70	460 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SLC4A5	Q9BY07	1137 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LHX5	Q9H2C1	402 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SAMSN1	Q9NSI8	373 aa	Known RBP	12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TMEM51	Q9NW97	253 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	STOML2	Q9UJZ1	356 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	FBXO10	Q9UK96	956 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	STARD13	Q9Y3M8	1113 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ATG2B	Q96BY7	2078 aa		12.89	□□□□□ -0.35
CLTCL1-205	ENST00000538828	WDR87	Q6ZQQ6	2873 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KIAA1549L	Q6ZVL6	1849 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	USP34	Q70CQ2	3546 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828		K7EQS6	105 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RNF40	O75150	1001 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GLI1	P08151	1106 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GNA15	P30679	374 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SATB1	Q01826	763 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	MYL5	Q02045	173 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828		Q6ZS52	159 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	RSRC2	Q7L4I2	434 aa	Known RBP	12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	WDR5B	Q86VZ2	330 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	PHTF2	Q8N3S3	785 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SUMF1	Q8NBK3	374 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ANKRD20A12P	Q8NF67	263 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	USP33	Q8TEY7	942 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EZH1	Q92800	747 aa	Predicted RBP	12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GOLGA1	Q92805	767 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	XPO6	Q96QU8	1125 aa	Known RBP	12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	BPIFA3	Q9BQP9	254 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DEC1	Q9P2X7	70 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EBF1	Q9UH73	591 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	DNAJC12	Q9UKB3	198 aa		12.88	□□□□□ -0.35
CLTCL1-205	ENST00000538828	SPAG17	Q6Q759	2223 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	YJEFN3	A6XGL0	299 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828		E7ENQ6	273 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GABBR2	O75899	941 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LETM1	O95202	739 aa	Predicted RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KAT7	O95251	611 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	PENK	P01210	267 aa	Predicted RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	LTF	P02788	710 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	CHRM1	P11229	460 aa	Predicted RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	PTMS	P20962	102 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	HARS2	P49590	506 aa	Known RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KCNMA1	Q12791	1236 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	EFEMP1	Q12805	493 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	KLHDC7A	Q5VTJ3	777 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	ASCL5	Q7RTU5	278 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TRMT11	Q7Z4G4	463 aa	Known RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TMEM25	Q86YD3	366 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	UNC45B	Q8IWX7	931 aa		12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	GPR161	Q8N6U8	529 aa	Known RBP	12.87	□□□□□ -0.35
CLTCL1-205	ENST00000538828	TTC16	Q8NEE8	873 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms